Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF140P52738 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF140P52738 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZNF140P52738 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF140P52738 AC121338.2-201ENST00000622535 1744 ntBASIC20.73■□□□□ 0.91
ZNF140P52738 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZNF140P52738 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF140P52738 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF140P52738 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF140P52738 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF140P52738 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF140P52738 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF140P52738 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF140P52738 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF140P52738 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZNF140P52738 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF140P52738 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF140P52738 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ZNF140P52738 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF140P52738 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ZNF140P52738 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF140P52738 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF140P52738 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF140P52738 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF140P52738 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ZNF140P52738 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNF140P52738 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF140P52738 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF140P52738 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF140P52738 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF140P52738 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF140P52738 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF140P52738 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF140P52738 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF140P52738 AC006015.1-201ENST00000429970 570 ntBASIC20.71■□□□□ 0.91
ZNF140P52738 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.71■□□□□ 0.91
ZNF140P52738 KRT18P11-201ENST00000435214 1283 ntBASIC20.71■□□□□ 0.91
ZNF140P52738 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF140P52738 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF140P52738 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.71■□□□□ 0.91
ZNF140P52738 AC011484.1-201ENST00000377652 1995 ntBASIC20.71■□□□□ 0.91
ZNF140P52738 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF140P52738 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF140P52738 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF140P52738 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF140P52738 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF140P52738 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF140P52738 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF140P52738 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.7■□□□□ 0.91
ZNF140P52738 AC006128.1-201ENST00000624704 1661 ntBASIC20.7■□□□□ 0.91
ZNF140P52738 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF140P52738 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF140P52738 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ZNF140P52738 MFSD11-216ENST00000590393 1141 ntBASIC20.7■□□□□ 0.9
ZNF140P52738 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF140P52738 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF140P52738 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF140P52738 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF140P52738 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ZNF140P52738 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF140P52738 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF140P52738 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF140P52738 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF140P52738 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ZNF140P52738 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF140P52738 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF140P52738 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF140P52738 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF140P52738 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF140P52738 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF140P52738 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF140P52738 AC091799.1-201ENST00000422823 811 ntBASIC20.69■□□□□ 0.9
ZNF140P52738 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ZNF140P52738 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF140P52738 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF140P52738 AC010536.3-201ENST00000620306 533 ntBASIC20.69■□□□□ 0.9
ZNF140P52738 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF140P52738 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ZNF140P52738 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF140P52738 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.69■□□□□ 0.9
ZNF140P52738 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF140P52738 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF140P52738 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF140P52738 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ZNF140P52738 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF140P52738 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF140P52738 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
ZNF140P52738 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
ZNF140P52738 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF140P52738 AC016769.1-201ENST00000409132 1010 ntBASIC20.68■□□□□ 0.9
ZNF140P52738 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF140P52738 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms