Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLK3P49761 YBX1P1-201ENST00000445822 960 ntBASIC19.61■□□□□ 0.73
CLK3P49761 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLK3P49761 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLK3P49761 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLK3P49761 AC005224.4-201ENST00000583262 1652 ntBASIC19.61■□□□□ 0.73
CLK3P49761 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.61■□□□□ 0.73
CLK3P49761 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK3P49761 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLK3P49761 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK3P49761 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLK3P49761 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK3P49761 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.6■□□□□ 0.73
CLK3P49761 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK3P49761 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CLK3P49761 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLK3P49761 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK3P49761 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.6■□□□□ 0.73
CLK3P49761 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK3P49761 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CLK3P49761 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.6■□□□□ 0.73
CLK3P49761 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.6■□□□□ 0.73
CLK3P49761 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.6■□□□□ 0.73
CLK3P49761 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
CLK3P49761 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.6■□□□□ 0.73
CLK3P49761 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CLK3P49761 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK3P49761 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.6■□□□□ 0.73
CLK3P49761 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.6■□□□□ 0.73
CLK3P49761 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLK3P49761 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.59■□□□□ 0.73
CLK3P49761 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.59■□□□□ 0.73
CLK3P49761 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.59■□□□□ 0.73
CLK3P49761 AC104564.3-201ENST00000582367 638 ntBASIC19.59■□□□□ 0.73
CLK3P49761 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 AP006587.3-201ENST00000525742 1516 ntBASIC19.59■□□□□ 0.73
CLK3P49761 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK3P49761 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK3P49761 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK3P49761 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK3P49761 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.58■□□□□ 0.73
CLK3P49761 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.58■□□□□ 0.73
CLK3P49761 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK3P49761 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLK3P49761 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CLK3P49761 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLK3P49761 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK3P49761 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.58■□□□□ 0.73
CLK3P49761 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLK3P49761 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLK3P49761 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLK3P49761 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLK3P49761 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.58■□□□□ 0.72
CLK3P49761 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLK3P49761 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CLK3P49761 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.58■□□□□ 0.72
CLK3P49761 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.58■□□□□ 0.72
CLK3P49761 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.58■□□□□ 0.72
CLK3P49761 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.58■□□□□ 0.72
CLK3P49761 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLK3P49761 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.58■□□□□ 0.72
CLK3P49761 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLK3P49761 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.57■□□□□ 0.72
CLK3P49761 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.57■□□□□ 0.72
CLK3P49761 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.57■□□□□ 0.72
CLK3P49761 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CLK3P49761 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CLK3P49761 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
CLK3P49761 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CLK3P49761 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLK3P49761 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CLK3P49761 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.57■□□□□ 0.72
CLK3P49761 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.57■□□□□ 0.72
CLK3P49761 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLK3P49761 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK3P49761 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLK3P49761 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLK3P49761 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLK3P49761 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms