Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A12P48065 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC6A12P48065 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A12P48065 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SLC6A12P48065 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A12P48065 AC026271.2-201ENST00000428091 497 ntBASIC20.09■□□□□ 0.81
SLC6A12P48065 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC6A12P48065 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.09■□□□□ 0.81
SLC6A12P48065 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A12P48065 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC6A12P48065 NTF6G-201ENST00000591094 616 ntBASIC20.09■□□□□ 0.81
SLC6A12P48065 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC6A12P48065 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A12P48065 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC6A12P48065 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC6A12P48065 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC6A12P48065 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC6A12P48065 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
SLC6A12P48065 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SLC6A12P48065 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A12P48065 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SLC6A12P48065 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SLC6A12P48065 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A12P48065 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A12P48065 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A12P48065 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SLC6A12P48065 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SLC6A12P48065 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A12P48065 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
SLC6A12P48065 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC6A12P48065 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC6A12P48065 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC6A12P48065 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SLC6A12P48065 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A12P48065 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A12P48065 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC6A12P48065 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC6A12P48065 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A12P48065 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A12P48065 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A12P48065 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A12P48065 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A12P48065 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A12P48065 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC6A12P48065 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SLC6A12P48065 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC6A12P48065 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC6A12P48065 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.07■□□□□ 0.8
SLC6A12P48065 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A12P48065 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A12P48065 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A12P48065 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A12P48065 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SLC6A12P48065 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC6A12P48065 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A12P48065 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC6A12P48065 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLC6A12P48065 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC6A12P48065 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A12P48065 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC6A12P48065 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.06■□□□□ 0.8
SLC6A12P48065 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 AC243732.1-201ENST00000612648 864 ntBASIC20.06■□□□□ 0.8
SLC6A12P48065 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
SLC6A12P48065 RBM17P2-201ENST00000616397 1405 ntBASIC20.06■□□□□ 0.8
SLC6A12P48065 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC6A12P48065 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A12P48065 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A12P48065 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC6A12P48065 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A12P48065 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SLC6A12P48065 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A12P48065 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC6A12P48065 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms