Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YGR161W-AYGR161W-A 1317 nt3.04□□□□□ -1.92
NDE1P40215 PCI8YIL071C 1335 nt3.04□□□□□ -1.92
NDE1P40215 YBL100W-AYBL100W-A 1317 nt3.04□□□□□ -1.92
NDE1P40215 YCL020WYCL020W 1317 nt3.04□□□□□ -1.92
NDE1P40215 FIR1YER032W 2631 nt3.04□□□□□ -1.92
NDE1P40215 YAL037WYAL037W 804 nt3.04□□□□□ -1.92
NDE1P40215 YLR230WYLR230W 306 nt3.04□□□□□ -1.92
NDE1P40215 YOL019W-AYOL019W-A 153 nt3.04□□□□□ -1.92
NDE1P40215 AFT2YPL202C 1251 nt3.04□□□□□ -1.92
NDE1P40215 YBR062CYBR062C 543 nt3.04□□□□□ -1.92
NDE1P40215 CUR1YPR158W 759 nt3.04□□□□□ -1.92
NDE1P40215 SHS1YDL225W 1656 nt3.04□□□□□ -1.92
NDE1P40215 YLR108CYLR108C 1458 nt3.03□□□□□ -1.92
NDE1P40215 FIN1YDR130C 876 nt3.03□□□□□ -1.92
NDE1P40215 YDR193WYDR193W 399 nt3.03□□□□□ -1.92
NDE1P40215 YER158W-AYER158W-A 216 nt3.03□□□□□ -1.92
NDE1P40215 YLL044WYLL044W 447 nt3.03□□□□□ -1.92
NDE1P40215 IRC21YMR073C 606 nt3.03□□□□□ -1.92
NDE1P40215 SFM1YOR021C 642 nt3.03□□□□□ -1.92
NDE1P40215 ALY1YKR021W 2748 nt3.03□□□□□ -1.92
NDE1P40215 RPA190YOR341W 4995 nt3.03□□□□□ -1.92
NDE1P40215 STT4YLR305C 5703 nt3.03□□□□□ -1.92
NDE1P40215 MES1YGR264C 2256 nt3.02□□□□□ -1.93
NDE1P40215 DAD1YDR016C 285 nt3.02□□□□□ -1.93
NDE1P40215 UBC12YLR306W 567 nt3.02□□□□□ -1.93
NDE1P40215 YRO2YBR054W 1035 nt3.02□□□□□ -1.93
NDE1P40215 ATP20YPR020W 348 nt3.02□□□□□ -1.93
NDE1P40215 RLF2YPR018W 1821 nt3.02□□□□□ -1.93
NDE1P40215 ARP4YJL081C 1470 nt3.02□□□□□ -1.93
NDE1P40215 PBS2YJL128C 2007 nt3.02□□□□□ -1.93
NDE1P40215 TMA64YDR117C 1698 nt3.01□□□□□ -1.93
NDE1P40215 PHD1YKL043W 1101 nt3.01□□□□□ -1.93
NDE1P40215 YKL091CYKL091C 933 nt3.01□□□□□ -1.93
NDE1P40215 CBP6YBR120C 489 nt3.01□□□□□ -1.93
NDE1P40215 DRS2YAL026C 4068 nt3.01□□□□□ -1.93
NDE1P40215 KAP104YBR017C 2757 nt3.01□□□□□ -1.93
NDE1P40215 GCD10YNL062C 1437 nt3.01□□□□□ -1.93
NDE1P40215 PGD1YGL025C 1194 nt3□□□□□ -1.93
NDE1P40215 NOP19YGR251W 591 nt3□□□□□ -1.93
NDE1P40215 CPR7YJR032W 1182 nt3□□□□□ -1.93
NDE1P40215 YET1YKL065C 621 nt3□□□□□ -1.93
NDE1P40215 ADF1YCL058W-A 342 nt3□□□□□ -1.93
NDE1P40215 POL3YDL102W 3294 nt3□□□□□ -1.93
NDE1P40215 SIP3YNL257C 3690 nt3□□□□□ -1.93
NDE1P40215 SLH1YGR271W 5904 nt3□□□□□ -1.93
NDE1P40215 YLR446WYLR446W 1302 nt2.99□□□□□ -1.93
NDE1P40215 COG3YER157W 2406 nt2.99□□□□□ -1.93
NDE1P40215 SCY1YGL083W 2415 nt2.99□□□□□ -1.93
NDE1P40215 ADY4YLR227C 1482 nt2.99□□□□□ -1.93
NDE1P40215 YER091C-AYER091C-A 222 nt2.99□□□□□ -1.93
NDE1P40215 YPT52YKR014C 705 nt2.99□□□□□ -1.93
NDE1P40215 COX8YLR395C 237 nt2.99□□□□□ -1.93
NDE1P40215 SEC14YMR079W 915 nt2.99□□□□□ -1.93
NDE1P40215 DBP7YKR024C 2229 nt2.99□□□□□ -1.93
NDE1P40215 SIN3YOL004W 4611 nt2.98□□□□□ -1.93
NDE1P40215 MRH1YDR033W 963 nt2.98□□□□□ -1.93
NDE1P40215 YER189WYER189W 369 nt2.98□□□□□ -1.93
NDE1P40215 PPX1YHR201C 1194 nt2.98□□□□□ -1.93
NDE1P40215 NYV1YLR093C 762 nt2.98□□□□□ -1.93
NDE1P40215 RPS16AYMR143W 432 nt2.98□□□□□ -1.93
NDE1P40215 BFR1YOR198C 1413 nt2.98□□□□□ -1.93
NDE1P40215 NPR3YHL023C 3441 nt2.98□□□□□ -1.93
NDE1P40215 PAM1YDR251W 2493 nt2.98□□□□□ -1.93
NDE1P40215 SWC4YGR002C 1431 nt2.97□□□□□ -1.93
NDE1P40215 YDR203WYDR203W 318 nt2.97□□□□□ -1.93
NDE1P40215 YDR248CYDR248C 582 nt2.97□□□□□ -1.93
NDE1P40215 tF(GAA)DtF(GAA)D 73 nt2.97□□□□□ -1.93
NDE1P40215 tF(GAA)NtF(GAA)N 73 nt2.97□□□□□ -1.93
NDE1P40215 MRM2YGL136C 963 nt2.97□□□□□ -1.93
NDE1P40215 tQ(UUG)BtQ(UUG)B 72 nt2.97□□□□□ -1.93
NDE1P40215 ASG7YJL170C 630 nt2.97□□□□□ -1.93
NDE1P40215 RPL17BYJL177W 555 nt2.97□□□□□ -1.93
NDE1P40215 CAP1YKL007W 807 nt2.97□□□□□ -1.93
NDE1P40215 MRPL16YBL038W 699 nt2.97□□□□□ -1.93
NDE1P40215 COQ10YOL008W 624 nt2.97□□□□□ -1.93
NDE1P40215 YAP7YOL028C 738 nt2.97□□□□□ -1.93
NDE1P40215 MSN1YOL116W 1149 nt2.97□□□□□ -1.93
NDE1P40215 CRS5YOR031W 210 nt2.97□□□□□ -1.93
NDE1P40215 YBR051WYBR051W 351 nt2.97□□□□□ -1.93
NDE1P40215 YCL002CYCL002C 792 nt2.97□□□□□ -1.93
NDE1P40215 MFB1YDR219C 1398 nt2.97□□□□□ -1.93
NDE1P40215 KAR9YPL269W 1935 nt2.97□□□□□ -1.93
NDE1P40215 SPO14YKR031C 5052 nt2.97□□□□□ -1.93
NDE1P40215 snR76snR76 109 nt2.96□□□□□ -1.94
NDE1P40215 YGR109W-AYGR109W-A 873 nt2.96□□□□□ -1.94
NDE1P40215 QCR10YHR001W-A 234 nt2.96□□□□□ -1.94
NDE1P40215 DOG2YHR043C 741 nt2.96□□□□□ -1.94
NDE1P40215 YIL082WYIL082W 873 nt2.96□□□□□ -1.94
NDE1P40215 YJL086CYJL086C 369 nt2.96□□□□□ -1.94
NDE1P40215 YOL134CYOL134C 390 nt2.96□□□□□ -1.94
NDE1P40215 DNL4YOR005C 2835 nt2.95□□□□□ -1.94
NDE1P40215 JSN1YJR091C 3276 nt2.95□□□□□ -1.94
NDE1P40215 BUD4YJR092W 4344 nt2.95□□□□□ -1.94
NDE1P40215 YCR090CYCR090C 549 nt2.95□□□□□ -1.94
NDE1P40215 PBP4YDL053C 558 nt2.95□□□□□ -1.94
NDE1P40215 AST2YER101C 1293 nt2.95□□□□□ -1.94
NDE1P40215 YGR107WYGR107W 450 nt2.95□□□□□ -1.94
NDE1P40215 YHR050W-AYHR050W-A 171 nt2.95□□□□□ -1.94
NDE1P40215 CWC24YLR323C 780 nt2.95□□□□□ -1.94
NDE1P40215 YBL039W-BYBL039W-B 180 nt2.95□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 50.3 ms