Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YIL068W-AYIL068W-A 384 nt2.47□□□□□ -2.01
RTR1P40084 BLS1YLR408C 369 nt2.47□□□□□ -2.01
RTR1P40084 ADI1YMR009W 540 nt2.47□□□□□ -2.01
RTR1P40084 PDR17YNL264C 1053 nt2.47□□□□□ -2.01
RTR1P40084 YPR142CYPR142C 564 nt2.47□□□□□ -2.01
RTR1P40084 YCL007CYCL007C 393 nt2.47□□□□□ -2.01
RTR1P40084 RIM13YMR154C 2184 nt2.46□□□□□ -2.02
RTR1P40084 snR68snR68 136 nt2.46□□□□□ -2.02
RTR1P40084 SNU23YDL098C 585 nt2.46□□□□□ -2.02
RTR1P40084 YKL070WYKL070W 510 nt2.46□□□□□ -2.02
RTR1P40084 RPL36AYMR194W 303 nt2.46□□□□□ -2.02
RTR1P40084 YOL159C-AYOL159C-A 273 nt2.46□□□□□ -2.02
RTR1P40084 VMA9YCL005W-A 222 nt2.46□□□□□ -2.02
RTR1P40084 SIR3YLR442C 2937 nt2.46□□□□□ -2.02
RTR1P40084 SET2YJL168C 2202 nt2.46□□□□□ -2.02
RTR1P40084 SST2YLR452C 2097 nt2.45□□□□□ -2.02
RTR1P40084 GPI8YDR331W 1236 nt2.45□□□□□ -2.02
RTR1P40084 DIG2YDR480W 972 nt2.45□□□□□ -2.02
RTR1P40084 POP6YGR030C 477 nt2.45□□□□□ -2.02
RTR1P40084 YIR023C-AYIR023C-A 324 nt2.45□□□□□ -2.02
RTR1P40084 PDS5YMR076C 3834 nt2.45□□□□□ -2.02
RTR1P40084 NEL1YHR035W 1893 nt2.45□□□□□ -2.02
RTR1P40084 SAK1YER129W 3429 nt2.45□□□□□ -2.02
RTR1P40084 SWA2YDR320C 2007 nt2.44□□□□□ -2.02
RTR1P40084 AMS1YGL156W 3252 nt2.44□□□□□ -2.02
RTR1P40084 KEG1YFR042W 603 nt2.44□□□□□ -2.02
RTR1P40084 YBL012CYBL012C 402 nt2.44□□□□□ -2.02
RTR1P40084 TSR4YOL022C 1227 nt2.44□□□□□ -2.02
RTR1P40084 RPL25YOL127W 429 nt2.44□□□□□ -2.02
RTR1P40084 SIP3YNL257C 3690 nt2.44□□□□□ -2.02
RTR1P40084 YLR108CYLR108C 1458 nt2.44□□□□□ -2.02
RTR1P40084 NCS2YNL119W 1482 nt2.44□□□□□ -2.02
RTR1P40084 PHO2YDL106C 1680 nt2.44□□□□□ -2.02
RTR1P40084 AGE1YDR524C 1449 nt2.43□□□□□ -2.02
RTR1P40084 YCR013CYCR013C 648 nt2.43□□□□□ -2.02
RTR1P40084 PIB1YDR313C 861 nt2.43□□□□□ -2.02
RTR1P40084 EDC1YGL222C 528 nt2.43□□□□□ -2.02
RTR1P40084 NOP19YGR251W 591 nt2.43□□□□□ -2.02
RTR1P40084 EBP2YKL172W 1284 nt2.43□□□□□ -2.02
RTR1P40084 LIP2YLR239C 987 nt2.43□□□□□ -2.02
RTR1P40084 YPL071CYPL071C 471 nt2.43□□□□□ -2.02
RTR1P40084 PEX8YGR077C 1770 nt2.43□□□□□ -2.02
RTR1P40084 MUB1YMR100W 1863 nt2.43□□□□□ -2.02
RTR1P40084 GIP3YPL137C 3831 nt2.43□□□□□ -2.02
RTR1P40084 NEO1YIL048W 3456 nt2.43□□□□□ -2.02
RTR1P40084 BIT61YJL058C 1632 nt2.42□□□□□ -2.02
RTR1P40084 SDC25YLL016W 3147 nt2.42□□□□□ -2.02
RTR1P40084 POM152YMR129W 4014 nt2.42□□□□□ -2.02
RTR1P40084 TOR2YKL203C 7425 nt2.42□□□□□ -2.02
RTR1P40084 PET100YDR079W 336 nt2.42□□□□□ -2.02
RTR1P40084 RTS3YGR161C 792 nt2.42□□□□□ -2.02
RTR1P40084 SRT1YMR101C 1032 nt2.42□□□□□ -2.02
RTR1P40084 AIM36YMR157C 768 nt2.42□□□□□ -2.02
RTR1P40084 YNL276CYNL276C 396 nt2.42□□□□□ -2.02
RTR1P40084 LDH1YBR204C 1128 nt2.42□□□□□ -2.02
RTR1P40084 TRM2YKR056W 1920 nt2.42□□□□□ -2.02
RTR1P40084 YPK1YKL126W 2043 nt2.41□□□□□ -2.02
RTR1P40084 RPL27BYDR471W 411 nt2.41□□□□□ -2.02
RTR1P40084 HLR1YDR528W 1272 nt2.41□□□□□ -2.02
RTR1P40084 ANS1YHR126C 480 nt2.41□□□□□ -2.02
RTR1P40084 YIR036W-AYIR036W-A 402 nt2.41□□□□□ -2.02
RTR1P40084 YMR178WYMR178W 825 nt2.41□□□□□ -2.02
RTR1P40084 MCD1YDL003W 1701 nt2.41□□□□□ -2.02
RTR1P40084 NOP14YDL148C 2433 nt2.41□□□□□ -2.02
RTR1P40084 YJL016WYJL016W 1686 nt2.41□□□□□ -2.02
RTR1P40084 DBF20YPR111W 1695 nt2.41□□□□□ -2.02
RTR1P40084 UBP2YOR124C 3819 nt2.4□□□□□ -2.02
RTR1P40084 AI3Q0060 1248 nt2.4□□□□□ -2.03
RTR1P40084 YHL045WYHL045W 348 nt2.4□□□□□ -2.03
RTR1P40084 RPL6BYLR448W 531 nt2.4□□□□□ -2.03
RTR1P40084 SPO20YMR017W 1194 nt2.4□□□□□ -2.03
RTR1P40084 PEP1YBL017C 4740 nt2.4□□□□□ -2.03
RTR1P40084 TMA64YDR117C 1698 nt2.4□□□□□ -2.03
RTR1P40084 HOP1YIL072W 1818 nt2.4□□□□□ -2.03
RTR1P40084 MDM10YAL010C 1482 nt2.39□□□□□ -2.03
RTR1P40084 FKS1YLR342W 5631 nt2.39□□□□□ -2.03
RTR1P40084 YGR111WYGR111W 1203 nt2.39□□□□□ -2.03
RTR1P40084 DSE2YHR143W 978 nt2.39□□□□□ -2.03
RTR1P40084 ECM13YBL043W 774 nt2.39□□□□□ -2.03
RTR1P40084 EAF7YNL136W 1278 nt2.39□□□□□ -2.03
RTR1P40084 CDC5YMR001C 2118 nt2.39□□□□□ -2.03
RTR1P40084 MFA1YDR461W 111 nt2.38□□□□□ -2.03
RTR1P40084 EMI1YDR512C 564 nt2.38□□□□□ -2.03
RTR1P40084 SIR4YDR227W 4077 nt2.38□□□□□ -2.03
RTR1P40084 KSP1YHR082C 3090 nt2.38□□□□□ -2.03
RTR1P40084 YLL047WYLL047W 384 nt2.37□□□□□ -2.03
RTR1P40084 RUF20RUF20 443 nt2.37□□□□□ -2.03
RTR1P40084 YMR272W-BYMR272W-B 108 nt2.37□□□□□ -2.03
RTR1P40084 ATP3YBR039W 936 nt2.37□□□□□ -2.03
RTR1P40084 MUD1YBR119W 897 nt2.37□□□□□ -2.03
RTR1P40084 snR34snR34 203 nt2.37□□□□□ -2.03
RTR1P40084 STH1YIL126W 4080 nt2.37□□□□□ -2.03
RTR1P40084 SLF1YDR515W 1344 nt2.37□□□□□ -2.03
RTR1P40084 SSF2YDR312W 1362 nt2.36□□□□□ -2.03
RTR1P40084 YIL080WYIL080W 4722 nt2.36□□□□□ -2.03
RTR1P40084 YNL018CYNL018C 1839 nt2.36□□□□□ -2.03
RTR1P40084 YDL118WYDL118W 381 nt2.36□□□□□ -2.03
RTR1P40084 YRB1YDR002W 606 nt2.36□□□□□ -2.03
RTR1P40084 YGR293CYGR293C 462 nt2.36□□□□□ -2.03
RTR1P40084 YKL162CYKL162C 1209 nt2.36□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 5.9 ms