Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.34■■□□□ 1.81
RFC4P35249 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RFC4P35249 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.34■■□□□ 1.81
RFC4P35249 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFC4P35249 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFC4P35249 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.33■■□□□ 1.81
RFC4P35249 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFC4P35249 KRT18P21-201ENST00000515767 1272 ntBASIC26.33■■□□□ 1.81
RFC4P35249 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.33■■□□□ 1.81
RFC4P35249 AC233702.5-201ENST00000584107 538 ntBASIC26.33■■□□□ 1.81
RFC4P35249 CYP21A1P-202ENST00000354927 1481 ntBASIC26.33■■□□□ 1.81
RFC4P35249 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.33■■□□□ 1.81
RFC4P35249 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RFC4P35249 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.32■■□□□ 1.8
RFC4P35249 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFC4P35249 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFC4P35249 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.32■■□□□ 1.8
RFC4P35249 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFC4P35249 RPS2P55-201ENST00000397318 883 ntBASIC26.32■■□□□ 1.8
RFC4P35249 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.32■■□□□ 1.8
RFC4P35249 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.32■■□□□ 1.8
RFC4P35249 AC107956.1-201ENST00000494359 873 ntBASIC26.32■■□□□ 1.8
RFC4P35249 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RFC4P35249 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.32■■□□□ 1.8
RFC4P35249 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.32■■□□□ 1.8
RFC4P35249 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.32■■□□□ 1.8
RFC4P35249 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFC4P35249 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
RFC4P35249 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 TSPY7P-201ENST00000431358 1114 ntBASIC26.31■■□□□ 1.8
RFC4P35249 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 KRT17P2-201ENST00000300992 1314 ntBASIC26.31■■□□□ 1.8
RFC4P35249 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFC4P35249 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
RFC4P35249 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFC4P35249 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFC4P35249 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFC4P35249 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.3■■□□□ 1.8
RFC4P35249 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFC4P35249 AC105020.6-201ENST00000621523 1217 ntBASIC26.3■■□□□ 1.8
RFC4P35249 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.3■■□□□ 1.8
RFC4P35249 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.3■■□□□ 1.8
RFC4P35249 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.3■■□□□ 1.8
RFC4P35249 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFC4P35249 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RFC4P35249 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RFC4P35249 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.29■■□□□ 1.8
RFC4P35249 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RFC4P35249 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFC4P35249 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RFC4P35249 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFC4P35249 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.29■■□□□ 1.8
RFC4P35249 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.29■■□□□ 1.8
RFC4P35249 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.29■■□□□ 1.8
RFC4P35249 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.29■■□□□ 1.8
RFC4P35249 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFC4P35249 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.29■■□□□ 1.8
RFC4P35249 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RFC4P35249 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.29■■□□□ 1.8
RFC4P35249 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFC4P35249 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFC4P35249 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFC4P35249 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.28■■□□□ 1.8
RFC4P35249 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.28■■□□□ 1.8
RFC4P35249 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RFC4P35249 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.28■■□□□ 1.8
RFC4P35249 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.28■■□□□ 1.8
RFC4P35249 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RFC4P35249 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.28■■□□□ 1.8
RFC4P35249 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
RFC4P35249 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFC4P35249 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.28■■□□□ 1.8
RFC4P35249 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFC4P35249 AC026471.6-201ENST00000622954 1905 ntBASIC26.27■■□□□ 1.8
RFC4P35249 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.27■■□□□ 1.8
RFC4P35249 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.27■■□□□ 1.8
RFC4P35249 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RFC4P35249 MTDHP1-201ENST00000605323 784 ntBASIC26.27■■□□□ 1.8
RFC4P35249 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
RFC4P35249 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
RFC4P35249 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RFC4P35249 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
RFC4P35249 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFC4P35249 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RFC4P35249 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms