Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC1P35052 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC1P35052 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC1P35052 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC1P35052 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC1P35052 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GPC1P35052 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC1P35052 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.67■□□□□ 0.74
GPC1P35052 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.67■□□□□ 0.74
GPC1P35052 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC1P35052 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC1P35052 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.66■□□□□ 0.74
GPC1P35052 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GPC1P35052 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC1P35052 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
GPC1P35052 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.66■□□□□ 0.74
GPC1P35052 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.66■□□□□ 0.74
GPC1P35052 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC1P35052 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC1P35052 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC1P35052 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC1P35052 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC1P35052 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC1P35052 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC1P35052 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GPC1P35052 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC1P35052 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC1P35052 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC1P35052 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC1P35052 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC1P35052 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC1P35052 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC1P35052 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC1P35052 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC1P35052 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC1P35052 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GPC1P35052 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GPC1P35052 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC1P35052 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC1P35052 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.65■□□□□ 0.74
GPC1P35052 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC1P35052 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC1P35052 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC1P35052 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GPC1P35052 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.64■□□□□ 0.74
GPC1P35052 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GPC1P35052 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GPC1P35052 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC1P35052 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.64■□□□□ 0.73
GPC1P35052 AC008175.2-201ENST00000612840 297 ntBASIC19.64■□□□□ 0.73
GPC1P35052 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.64■□□□□ 0.73
GPC1P35052 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC1P35052 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
GPC1P35052 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.64■□□□□ 0.73
GPC1P35052 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
GPC1P35052 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC1P35052 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC1P35052 AL121603.2-201ENST00000557373 2117 ntBASIC19.64■□□□□ 0.73
GPC1P35052 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC1P35052 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GPC1P35052 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC1P35052 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC1P35052 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC1P35052 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 AP004607.4-201ENST00000530158 1459 ntBASIC19.63■□□□□ 0.73
GPC1P35052 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.63■□□□□ 0.73
GPC1P35052 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC1P35052 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.63■□□□□ 0.73
GPC1P35052 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.63■□□□□ 0.73
GPC1P35052 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
GPC1P35052 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
GPC1P35052 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GPC1P35052 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC1P35052 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC1P35052 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GPC1P35052 AC061975.6-201ENST00000579045 1553 ntBASIC19.62■□□□□ 0.73
GPC1P35052 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.62■□□□□ 0.73
GPC1P35052 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC1P35052 AC073130.3-201ENST00000624389 2278 ntBASIC19.62■□□□□ 0.73
GPC1P35052 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC1P35052 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC1P35052 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC1P35052 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
GPC1P35052 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
GPC1P35052 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC1P35052 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC1P35052 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC1P35052 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.62■□□□□ 0.73
GPC1P35052 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC1P35052 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms