Protein–RNA interactions for Protein: P26358

DNMT1, DNA (cytosine-5)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 1,616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1P26358 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
DNMT1P26358 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC31.38■■■□□ 2.61
DNMT1P26358 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC31.38■■■□□ 2.61
DNMT1P26358 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
DNMT1P26358 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
DNMT1P26358 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
DNMT1P26358 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
DNMT1P26358 UNC93B4-201ENST00000505679 747 ntBASIC31.38■■■□□ 2.61
DNMT1P26358 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC31.38■■■□□ 2.61
DNMT1P26358 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC31.38■■■□□ 2.61
DNMT1P26358 USP36-216ENST00000589424 970 ntTSL 5 BASIC31.38■■■□□ 2.61
DNMT1P26358 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
DNMT1P26358 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
DNMT1P26358 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
DNMT1P26358 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC31.37■■■□□ 2.61
DNMT1P26358 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC31.37■■■□□ 2.61
DNMT1P26358 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC31.37■■■□□ 2.61
DNMT1P26358 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.37■■■□□ 2.61
DNMT1P26358 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
DNMT1P26358 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DNMT1P26358 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
DNMT1P26358 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DNMT1P26358 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
DNMT1P26358 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC31.36■■■□□ 2.61
DNMT1P26358 MMD2-204ENST00000612910 778 ntTSL 5 BASIC31.36■■■□□ 2.61
DNMT1P26358 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
DNMT1P26358 AC087633.2-202ENST00000565166 1439 ntBASIC31.36■■■□□ 2.61
DNMT1P26358 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
DNMT1P26358 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
DNMT1P26358 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DNMT1P26358 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 BAALC-201ENST00000297574 801 ntTSL 3 BASIC31.35■■■□□ 2.61
DNMT1P26358 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 AP003097.1-201ENST00000530657 1135 ntBASIC31.35■■■□□ 2.61
DNMT1P26358 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
DNMT1P26358 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC31.35■■■□□ 2.61
DNMT1P26358 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DNMT1P26358 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
DNMT1P26358 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DNMT1P26358 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
DNMT1P26358 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
DNMT1P26358 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC31.34■■■□□ 2.61
DNMT1P26358 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.34■■■□□ 2.61
DNMT1P26358 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
DNMT1P26358 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC31.34■■■□□ 2.61
DNMT1P26358 LSM12P1-201ENST00000411836 588 ntBASIC31.34■■■□□ 2.61
DNMT1P26358 NME6-213ENST00000451657 871 ntTSL 2 BASIC31.34■■■□□ 2.61
DNMT1P26358 GATS-209ENST00000454084 1030 ntTSL 3 BASIC31.34■■■□□ 2.61
DNMT1P26358 AC008403.3-201ENST00000598924 454 ntBASIC31.34■■■□□ 2.61
DNMT1P26358 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
DNMT1P26358 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
DNMT1P26358 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DNMT1P26358 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DNMT1P26358 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
DNMT1P26358 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC31.33■■■□□ 2.61
DNMT1P26358 AC128676.1-201ENST00000454392 318 ntBASIC31.33■■■□□ 2.61
DNMT1P26358 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DNMT1P26358 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC31.33■■■□□ 2.61
DNMT1P26358 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DNMT1P26358 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
DNMT1P26358 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
DNMT1P26358 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DNMT1P26358 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
DNMT1P26358 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
DNMT1P26358 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
DNMT1P26358 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC31.32■■■□□ 2.6
DNMT1P26358 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC31.32■■■□□ 2.6
DNMT1P26358 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
DNMT1P26358 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DNMT1P26358 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.32■■■□□ 2.6
DNMT1P26358 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
DNMT1P26358 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
DNMT1P26358 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
DNMT1P26358 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DNMT1P26358 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC31.31■■■□□ 2.6
DNMT1P26358 ME2-206ENST00000638410 2289 ntTSL 5 BASIC31.31■■■□□ 2.6
DNMT1P26358 ME2-210ENST00000639255 2262 ntTSL 5 BASIC31.31■■■□□ 2.6
DNMT1P26358 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DNMT1P26358 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC31.31■■■□□ 2.6
DNMT1P26358 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
DNMT1P26358 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
DNMT1P26358 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC31.31■■■□□ 2.6
DNMT1P26358 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC31.31■■■□□ 2.6
DNMT1P26358 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
DNMT1P26358 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC31.31■■■□□ 2.6
DNMT1P26358 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC31.3■■■□□ 2.6
DNMT1P26358 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC31.3■■■□□ 2.6
DNMT1P26358 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC31.3■■■□□ 2.6
DNMT1P26358 MMAB-206ENST00000540016 945 ntTSL 3 BASIC31.3■■■□□ 2.6
DNMT1P26358 KLF2-202ENST00000592003 564 ntTSL 3 BASIC31.3■■■□□ 2.6
DNMT1P26358 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DNMT1P26358 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DNMT1P26358 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms