Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL8A2P25067 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
COL8A2P25067 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL8A2P25067 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL8A2P25067 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL8A2P25067 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL8A2P25067 MKRN4P-201ENST00000444706 1521 ntBASIC17.58■□□□□ 0.41
COL8A2P25067 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL8A2P25067 AL512625.2-201ENST00000417533 625 ntBASIC17.58■□□□□ 0.4
COL8A2P25067 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.58■□□□□ 0.4
COL8A2P25067 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.58■□□□□ 0.4
COL8A2P25067 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.58■□□□□ 0.4
COL8A2P25067 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.58■□□□□ 0.4
COL8A2P25067 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
COL8A2P25067 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.58■□□□□ 0.4
COL8A2P25067 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL8A2P25067 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL8A2P25067 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
COL8A2P25067 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL8A2P25067 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.57■□□□□ 0.4
COL8A2P25067 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL8A2P25067 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL8A2P25067 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL8A2P25067 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL8A2P25067 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COL8A2P25067 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL8A2P25067 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.57■□□□□ 0.4
COL8A2P25067 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.57■□□□□ 0.4
COL8A2P25067 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.57■□□□□ 0.4
COL8A2P25067 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.57■□□□□ 0.4
COL8A2P25067 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.57■□□□□ 0.4
COL8A2P25067 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COL8A2P25067 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
COL8A2P25067 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL8A2P25067 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.57■□□□□ 0.4
COL8A2P25067 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COL8A2P25067 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL8A2P25067 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
COL8A2P25067 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COL8A2P25067 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 MIPEPP3-201ENST00000412105 444 ntBASIC17.56■□□□□ 0.4
COL8A2P25067 AC091799.1-201ENST00000422823 811 ntBASIC17.56■□□□□ 0.4
COL8A2P25067 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 AC245052.3-201ENST00000450182 901 ntBASIC17.56■□□□□ 0.4
COL8A2P25067 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
COL8A2P25067 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COL8A2P25067 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL8A2P25067 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COL8A2P25067 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.55■□□□□ 0.4
COL8A2P25067 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.55■□□□□ 0.4
COL8A2P25067 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.55■□□□□ 0.4
COL8A2P25067 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.55■□□□□ 0.4
COL8A2P25067 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.55■□□□□ 0.4
COL8A2P25067 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.55■□□□□ 0.4
COL8A2P25067 AL162412.1-201ENST00000567129 965 ntBASIC17.55■□□□□ 0.4
COL8A2P25067 AC133041.1-202ENST00000642053 222 ntBASIC17.55■□□□□ 0.4
COL8A2P25067 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.55■□□□□ 0.4
COL8A2P25067 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL8A2P25067 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL8A2P25067 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL8A2P25067 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL8A2P25067 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.54■□□□□ 0.4
COL8A2P25067 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL8A2P25067 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL8A2P25067 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL8A2P25067 AC069152.1-201ENST00000438030 544 ntBASIC17.54■□□□□ 0.4
COL8A2P25067 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.54■□□□□ 0.4
COL8A2P25067 RARRES2P4-201ENST00000514074 484 ntBASIC17.54■□□□□ 0.4
COL8A2P25067 AC098934.4-201ENST00000564127 592 ntBASIC17.54■□□□□ 0.4
COL8A2P25067 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.54■□□□□ 0.4
COL8A2P25067 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.54■□□□□ 0.4
COL8A2P25067 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
COL8A2P25067 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.54■□□□□ 0.4
COL8A2P25067 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL8A2P25067 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL8A2P25067 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms