Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCNCP24863 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNCP24863 RBM17P2-201ENST00000616397 1405 ntBASIC21.2■□□□□ 0.98
CCNCP24863 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNCP24863 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNCP24863 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNCP24863 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNCP24863 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCNCP24863 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCNCP24863 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNCP24863 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNCP24863 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNCP24863 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNCP24863 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNCP24863 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNCP24863 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNCP24863 PKD1P6-201ENST00000343738 4769 ntBASIC21.18■□□□□ 0.98
CCNCP24863 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNCP24863 PLK5-205ENST00000642079 1969 ntBASIC21.18■□□□□ 0.98
CCNCP24863 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNCP24863 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNCP24863 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNCP24863 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNCP24863 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.18■□□□□ 0.98
CCNCP24863 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNCP24863 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNCP24863 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNCP24863 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNCP24863 AC011484.1-201ENST00000377652 1995 ntBASIC21.17■□□□□ 0.98
CCNCP24863 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CCNCP24863 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNCP24863 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNCP24863 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CCNCP24863 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CCNCP24863 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNCP24863 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCNCP24863 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNCP24863 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNCP24863 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNCP24863 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNCP24863 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
CCNCP24863 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNCP24863 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNCP24863 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNCP24863 AC006128.1-201ENST00000624704 1661 ntBASIC21.16■□□□□ 0.98
CCNCP24863 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCNCP24863 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCNCP24863 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNCP24863 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNCP24863 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNCP24863 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.16■□□□□ 0.98
CCNCP24863 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNCP24863 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNCP24863 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNCP24863 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNCP24863 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNCP24863 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNCP24863 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNCP24863 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNCP24863 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNCP24863 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNCP24863 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNCP24863 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNCP24863 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNCP24863 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNCP24863 AC016769.1-201ENST00000409132 1010 ntBASIC21.15■□□□□ 0.98
CCNCP24863 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNCP24863 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.15■□□□□ 0.98
CCNCP24863 AC091799.1-201ENST00000422823 811 ntBASIC21.15■□□□□ 0.98
CCNCP24863 AC006015.1-201ENST00000429970 570 ntBASIC21.15■□□□□ 0.98
CCNCP24863 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNCP24863 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNCP24863 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNCP24863 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCNCP24863 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNCP24863 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.14■□□□□ 0.97
CCNCP24863 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNCP24863 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNCP24863 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNCP24863 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNCP24863 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNCP24863 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.14■□□□□ 0.97
CCNCP24863 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNCP24863 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNCP24863 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNCP24863 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNCP24863 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNCP24863 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNCP24863 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms