Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKB1P19838 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKB1P19838 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.14■□□□□ 0.97
NFKB1P19838 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NFKB1P19838 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NFKB1P19838 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.13■□□□□ 0.97
NFKB1P19838 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
NFKB1P19838 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NFKB1P19838 KRT19P1-201ENST00000405746 1186 ntBASIC21.13■□□□□ 0.97
NFKB1P19838 AC026271.2-201ENST00000428091 497 ntBASIC21.13■□□□□ 0.97
NFKB1P19838 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.13■□□□□ 0.97
NFKB1P19838 RARRES2P6-201ENST00000567333 442 ntBASIC21.13■□□□□ 0.97
NFKB1P19838 NTF6G-201ENST00000591094 616 ntBASIC21.13■□□□□ 0.97
NFKB1P19838 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.13■□□□□ 0.97
NFKB1P19838 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
NFKB1P19838 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NFKB1P19838 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NFKB1P19838 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKB1P19838 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NFKB1P19838 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.12■□□□□ 0.97
NFKB1P19838 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NFKB1P19838 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NFKB1P19838 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKB1P19838 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.12■□□□□ 0.97
NFKB1P19838 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKB1P19838 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NFKB1P19838 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKB1P19838 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKB1P19838 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKB1P19838 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKB1P19838 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
NFKB1P19838 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKB1P19838 AC006128.1-201ENST00000624704 1661 ntBASIC21.12■□□□□ 0.97
NFKB1P19838 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NFKB1P19838 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.11■□□□□ 0.97
NFKB1P19838 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
NFKB1P19838 KRT18P20-201ENST00000548986 1279 ntBASIC21.11■□□□□ 0.97
NFKB1P19838 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.11■□□□□ 0.97
NFKB1P19838 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.11■□□□□ 0.97
NFKB1P19838 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NFKB1P19838 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.11■□□□□ 0.97
NFKB1P19838 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKB1P19838 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.1■□□□□ 0.97
NFKB1P19838 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NFKB1P19838 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.1■□□□□ 0.97
NFKB1P19838 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.1■□□□□ 0.97
NFKB1P19838 AC245052.3-201ENST00000450182 901 ntBASIC21.1■□□□□ 0.97
NFKB1P19838 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.1■□□□□ 0.97
NFKB1P19838 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.1■□□□□ 0.97
NFKB1P19838 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.1■□□□□ 0.97
NFKB1P19838 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NFKB1P19838 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.1■□□□□ 0.97
NFKB1P19838 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NFKB1P19838 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NFKB1P19838 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKB1P19838 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NFKB1P19838 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.09■□□□□ 0.97
NFKB1P19838 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.09■□□□□ 0.97
NFKB1P19838 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.09■□□□□ 0.97
NFKB1P19838 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.09■□□□□ 0.97
NFKB1P19838 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKB1P19838 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.09■□□□□ 0.97
NFKB1P19838 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
NFKB1P19838 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms