Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRKCAP17252 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.17■□□□□ 0.66
PRKCAP17252 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.17■□□□□ 0.66
PRKCAP17252 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.17■□□□□ 0.66
PRKCAP17252 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.17■□□□□ 0.66
PRKCAP17252 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.17■□□□□ 0.66
PRKCAP17252 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.17■□□□□ 0.66
PRKCAP17252 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PRKCAP17252 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRKCAP17252 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.16■□□□□ 0.66
PRKCAP17252 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PRKCAP17252 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.16■□□□□ 0.66
PRKCAP17252 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.16■□□□□ 0.66
PRKCAP17252 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.16■□□□□ 0.66
PRKCAP17252 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.16■□□□□ 0.66
PRKCAP17252 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PRKCAP17252 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.16■□□□□ 0.66
PRKCAP17252 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.16■□□□□ 0.66
PRKCAP17252 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.16■□□□□ 0.66
PRKCAP17252 Z98882.1-201ENST00000622160 2253 ntBASIC19.16■□□□□ 0.66
PRKCAP17252 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRKCAP17252 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.15■□□□□ 0.66
PRKCAP17252 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.15■□□□□ 0.66
PRKCAP17252 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.15■□□□□ 0.66
PRKCAP17252 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.15■□□□□ 0.66
PRKCAP17252 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.15■□□□□ 0.66
PRKCAP17252 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.15■□□□□ 0.66
PRKCAP17252 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.15■□□□□ 0.66
PRKCAP17252 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.15■□□□□ 0.66
PRKCAP17252 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PRKCAP17252 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 AC004854.2-201ENST00000608450 1441 ntBASIC19.15■□□□□ 0.66
PRKCAP17252 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 AP004607.4-201ENST00000530158 1459 ntBASIC19.15■□□□□ 0.66
PRKCAP17252 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PRKCAP17252 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKCAP17252 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PRKCAP17252 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
PRKCAP17252 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
PRKCAP17252 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.14■□□□□ 0.66
PRKCAP17252 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.14■□□□□ 0.65
PRKCAP17252 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.14■□□□□ 0.65
PRKCAP17252 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PRKCAP17252 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKCAP17252 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PRKCAP17252 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.14■□□□□ 0.65
PRKCAP17252 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRKCAP17252 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRKCAP17252 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms