Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.18■□□□□ 0.66
UBL4AP11441 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
UBL4AP11441 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
UBL4AP11441 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.18■□□□□ 0.66
UBL4AP11441 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBL4AP11441 AC010141.2-201ENST00000452426 721 ntBASIC19.18■□□□□ 0.66
UBL4AP11441 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBL4AP11441 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
UBL4AP11441 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.18■□□□□ 0.66
UBL4AP11441 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.18■□□□□ 0.66
UBL4AP11441 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
UBL4AP11441 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
UBL4AP11441 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.18■□□□□ 0.66
UBL4AP11441 AC004854.2-201ENST00000608450 1441 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 AP004607.4-201ENST00000530158 1459 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 AL049796.1-201ENST00000565336 1766 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.17■□□□□ 0.66
UBL4AP11441 DUX4L2-201ENST00000561772 1275 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.17■□□□□ 0.66
UBL4AP11441 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
UBL4AP11441 MIR6821-201ENST00000617625 74 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 DUX4L6-201ENST00000626483 1275 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 DUX4L1-201ENST00000627662 1275 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 DUX4L8-201ENST00000629013 1275 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 DUX4L3-201ENST00000630187 1275 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 DUX4L7-201ENST00000630678 1275 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 DUX4L5-201ENST00000630834 1275 ntBASIC19.17■□□□□ 0.66
UBL4AP11441 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.17■□□□□ 0.66
UBL4AP11441 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.17■□□□□ 0.66
UBL4AP11441 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.17■□□□□ 0.66
UBL4AP11441 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBL4AP11441 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBL4AP11441 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
UBL4AP11441 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBL4AP11441 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.16■□□□□ 0.66
UBL4AP11441 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBL4AP11441 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBL4AP11441 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
UBL4AP11441 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBL4AP11441 AC034268.1-201ENST00000441047 882 ntBASIC19.16■□□□□ 0.66
UBL4AP11441 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.16■□□□□ 0.66
UBL4AP11441 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.16■□□□□ 0.66
UBL4AP11441 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.16■□□□□ 0.66
UBL4AP11441 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.16■□□□□ 0.66
UBL4AP11441 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBL4AP11441 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.16■□□□□ 0.66
UBL4AP11441 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBL4AP11441 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBL4AP11441 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBL4AP11441 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBL4AP11441 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
UBL4AP11441 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBL4AP11441 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.15■□□□□ 0.66
UBL4AP11441 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBL4AP11441 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBL4AP11441 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBL4AP11441 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBL4AP11441 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.15■□□□□ 0.66
UBL4AP11441 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.15■□□□□ 0.66
UBL4AP11441 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.15■□□□□ 0.66
UBL4AP11441 AP001160.3-201ENST00000601484 763 ntBASIC19.15■□□□□ 0.66
UBL4AP11441 AC120498.10-201ENST00000621827 505 ntBASIC19.15■□□□□ 0.66
UBL4AP11441 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UBL4AP11441 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBL4AP11441 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UBL4AP11441 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBL4AP11441 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBL4AP11441 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.14■□□□□ 0.66
UBL4AP11441 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBL4AP11441 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBL4AP11441 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.14■□□□□ 0.65
UBL4AP11441 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBL4AP11441 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.14■□□□□ 0.65
UBL4AP11441 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.14■□□□□ 0.65
UBL4AP11441 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.14■□□□□ 0.65
UBL4AP11441 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.14■□□□□ 0.65
UBL4AP11441 AC087623.3-201ENST00000607047 1098 ntBASIC19.14■□□□□ 0.65
UBL4AP11441 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.14■□□□□ 0.65
UBL4AP11441 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
UBL4AP11441 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBL4AP11441 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBL4AP11441 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.14■□□□□ 0.65
UBL4AP11441 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
UBL4AP11441 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
UBL4AP11441 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBL4AP11441 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
UBL4AP11441 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBL4AP11441 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.13■□□□□ 0.65
UBL4AP11441 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms