Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TCRAP04437 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TCRAP04437 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TCRAP04437 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TCRAP04437 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TCRAP04437 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TCRAP04437 KRT16P3-201ENST00000439127 1283 ntBASIC15.8■□□□□ 0.12
TCRAP04437 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRAP04437 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRAP04437 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TCRAP04437 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.8■□□□□ 0.12
TCRAP04437 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TCRAP04437 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRAP04437 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TCRAP04437 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.8■□□□□ 0.12
TCRAP04437 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TCRAP04437 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRAP04437 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRAP04437 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRAP04437 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TCRAP04437 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TCRAP04437 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRAP04437 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRAP04437 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TCRAP04437 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRAP04437 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRAP04437 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TCRAP04437 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRAP04437 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRAP04437 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRAP04437 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.78■□□□□ 0.12
TCRAP04437 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRAP04437 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TCRAP04437 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRAP04437 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TCRAP04437 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TCRAP04437 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRAP04437 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TCRAP04437 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TCRAP04437 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.77■□□□□ 0.12
TCRAP04437 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.77■□□□□ 0.12
TCRAP04437 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.77■□□□□ 0.12
TCRAP04437 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCRAP04437 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
TCRAP04437 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRAP04437 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.77■□□□□ 0.11
TCRAP04437 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRAP04437 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.77■□□□□ 0.11
TCRAP04437 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.77■□□□□ 0.11
TCRAP04437 AL162377.1-201ENST00000618844 1793 ntBASIC15.77■□□□□ 0.11
TCRAP04437 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.77■□□□□ 0.11
TCRAP04437 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.77■□□□□ 0.11
TCRAP04437 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRAP04437 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TCRAP04437 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.77■□□□□ 0.11
TCRAP04437 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms