Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.47■□□□□ 0.39
CD74P04233 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CD74P04233 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CD74P04233 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CD74P04233 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CD74P04233 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CD74P04233 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CD74P04233 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.46■□□□□ 0.39
CD74P04233 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD74P04233 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.46■□□□□ 0.38
CD74P04233 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CD74P04233 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CD74P04233 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CD74P04233 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.45■□□□□ 0.38
CD74P04233 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.45■□□□□ 0.38
CD74P04233 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.45■□□□□ 0.38
CD74P04233 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.45■□□□□ 0.38
CD74P04233 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.45■□□□□ 0.38
CD74P04233 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.45■□□□□ 0.38
CD74P04233 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 MIR6724-1-201ENST00000616420 92 ntBASIC17.45■□□□□ 0.38
CD74P04233 MIR6724-2-201ENST00000616483 92 ntBASIC17.45■□□□□ 0.38
CD74P04233 MIR6724-4-201ENST00000617390 92 ntBASIC17.45■□□□□ 0.38
CD74P04233 MIR6724-3-201ENST00000622482 92 ntBASIC17.45■□□□□ 0.38
CD74P04233 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.45■□□□□ 0.38
CD74P04233 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD74P04233 TCF3P1-201ENST00000423021 1937 ntBASIC17.45■□□□□ 0.38
CD74P04233 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CD74P04233 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CD74P04233 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CD74P04233 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CD74P04233 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CD74P04233 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.44■□□□□ 0.38
CD74P04233 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.44■□□□□ 0.38
CD74P04233 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.44■□□□□ 0.38
CD74P04233 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CD74P04233 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD74P04233 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.43■□□□□ 0.38
CD74P04233 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CD74P04233 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.43■□□□□ 0.38
CD74P04233 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.43■□□□□ 0.38
CD74P04233 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CD74P04233 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.43■□□□□ 0.38
CD74P04233 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.43■□□□□ 0.38
CD74P04233 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CD74P04233 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD74P04233 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD74P04233 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.42■□□□□ 0.38
CD74P04233 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms