Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.91■■□□□ 1.58
MBD4O95243 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
MBD4O95243 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
MBD4O95243 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
MBD4O95243 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
MBD4O95243 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.91■■□□□ 1.58
MBD4O95243 AL355802.2-201ENST00000402069 882 ntBASIC24.91■■□□□ 1.58
MBD4O95243 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
MBD4O95243 AL162412.1-201ENST00000567129 965 ntBASIC24.91■■□□□ 1.58
MBD4O95243 AC069236.1-201ENST00000604339 616 ntBASIC24.91■■□□□ 1.58
MBD4O95243 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
MBD4O95243 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
MBD4O95243 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
MBD4O95243 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.91■■□□□ 1.58
MBD4O95243 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.9■■□□□ 1.58
MBD4O95243 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
MBD4O95243 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.9■■□□□ 1.58
MBD4O95243 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.9■■□□□ 1.58
MBD4O95243 OR10C1-204ENST00000622521 1039 ntBASIC24.9■■□□□ 1.58
MBD4O95243 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.9■■□□□ 1.58
MBD4O95243 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
MBD4O95243 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
MBD4O95243 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
MBD4O95243 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
MBD4O95243 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
MBD4O95243 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.89■■□□□ 1.58
MBD4O95243 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
MBD4O95243 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.89■■□□□ 1.58
MBD4O95243 RARRES2P4-201ENST00000514074 484 ntBASIC24.89■■□□□ 1.58
MBD4O95243 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
MBD4O95243 AC008694.1-202ENST00000636953 945 ntBASIC24.89■■□□□ 1.58
MBD4O95243 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
MBD4O95243 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.89■■□□□ 1.57
MBD4O95243 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.89■■□□□ 1.57
MBD4O95243 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
MBD4O95243 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
MBD4O95243 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.88■■□□□ 1.57
MBD4O95243 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.88■■□□□ 1.57
MBD4O95243 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
MBD4O95243 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
MBD4O95243 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
MBD4O95243 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
MBD4O95243 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
MBD4O95243 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
MBD4O95243 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
MBD4O95243 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.87■■□□□ 1.57
MBD4O95243 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.87■■□□□ 1.57
MBD4O95243 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.87■■□□□ 1.57
MBD4O95243 AL138781.1-201ENST00000566567 1274 ntBASIC24.87■■□□□ 1.57
MBD4O95243 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.87■■□□□ 1.57
MBD4O95243 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.87■■□□□ 1.57
MBD4O95243 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
MBD4O95243 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
MBD4O95243 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.86■■□□□ 1.57
MBD4O95243 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
MBD4O95243 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
MBD4O95243 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
MBD4O95243 AL024507.2-201ENST00000606070 2574 ntBASIC24.86■■□□□ 1.57
MBD4O95243 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
MBD4O95243 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
MBD4O95243 SLC29A4P1-201ENST00000398760 971 ntBASIC24.86■■□□□ 1.57
MBD4O95243 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.86■■□□□ 1.57
MBD4O95243 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.86■■□□□ 1.57
MBD4O95243 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.86■■□□□ 1.57
MBD4O95243 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
MBD4O95243 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
MBD4O95243 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
MBD4O95243 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
MBD4O95243 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
MBD4O95243 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.85■■□□□ 1.57
MBD4O95243 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
MBD4O95243 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.85■■□□□ 1.57
MBD4O95243 MKRN4P-201ENST00000444706 1521 ntBASIC24.85■■□□□ 1.57
MBD4O95243 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
MBD4O95243 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
MBD4O95243 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.84■■□□□ 1.57
MBD4O95243 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
MBD4O95243 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
MBD4O95243 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
MBD4O95243 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
MBD4O95243 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
MBD4O95243 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
MBD4O95243 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
MBD4O95243 CDV3P1-201ENST00000471403 739 ntBASIC24.84■■□□□ 1.57
MBD4O95243 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.84■■□□□ 1.57
MBD4O95243 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.84■■□□□ 1.57
MBD4O95243 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.84■■□□□ 1.57
MBD4O95243 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.84■■□□□ 1.57
MBD4O95243 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
MBD4O95243 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
MBD4O95243 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
MBD4O95243 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms