Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDRT1O95170 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDRT1O95170 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.5■□□□□ 0.55
CDRT1O95170 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDRT1O95170 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.5■□□□□ 0.55
CDRT1O95170 AC241377.3-202ENST00000626088 1088 ntBASIC18.5■□□□□ 0.55
CDRT1O95170 AC241585.3-202ENST00000628937 1088 ntBASIC18.5■□□□□ 0.55
CDRT1O95170 AC245100.8-202ENST00000629247 1058 ntBASIC18.5■□□□□ 0.55
CDRT1O95170 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.5■□□□□ 0.55
CDRT1O95170 AC020907.5-201ENST00000624372 1936 ntBASIC18.5■□□□□ 0.55
CDRT1O95170 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDRT1O95170 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDRT1O95170 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDRT1O95170 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CDRT1O95170 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDRT1O95170 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.5■□□□□ 0.55
CDRT1O95170 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDRT1O95170 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.49■□□□□ 0.55
CDRT1O95170 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.49■□□□□ 0.55
CDRT1O95170 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CDRT1O95170 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDRT1O95170 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.49■□□□□ 0.55
CDRT1O95170 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.49■□□□□ 0.55
CDRT1O95170 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDRT1O95170 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.49■□□□□ 0.55
CDRT1O95170 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.49■□□□□ 0.55
CDRT1O95170 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.49■□□□□ 0.55
CDRT1O95170 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT1O95170 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.49■□□□□ 0.55
CDRT1O95170 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDRT1O95170 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDRT1O95170 AC006455.2-201ENST00000429931 906 ntBASIC18.48■□□□□ 0.55
CDRT1O95170 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CDRT1O95170 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT1O95170 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.48■□□□□ 0.55
CDRT1O95170 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT1O95170 AC133637.1-201ENST00000624115 1537 ntBASIC18.48■□□□□ 0.55
CDRT1O95170 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT1O95170 AC003102.1-202ENST00000563394 1796 ntBASIC18.47■□□□□ 0.55
CDRT1O95170 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT1O95170 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT1O95170 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDRT1O95170 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.47■□□□□ 0.55
CDRT1O95170 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT1O95170 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CDRT1O95170 KRT16P3-201ENST00000439127 1283 ntBASIC18.47■□□□□ 0.55
CDRT1O95170 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.47■□□□□ 0.55
CDRT1O95170 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.47■□□□□ 0.55
CDRT1O95170 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.47■□□□□ 0.55
CDRT1O95170 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CDRT1O95170 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.47■□□□□ 0.55
CDRT1O95170 pRNA.6-201ENST00000610482 90 ntBASIC18.47■□□□□ 0.55
CDRT1O95170 pRNA.5-201ENST00000612139 90 ntBASIC18.47■□□□□ 0.55
CDRT1O95170 pRNA.11-201ENST00000618423 90 ntBASIC18.47■□□□□ 0.55
CDRT1O95170 pRNA.13-201ENST00000619112 90 ntBASIC18.47■□□□□ 0.55
CDRT1O95170 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT1O95170 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CDRT1O95170 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDRT1O95170 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDRT1O95170 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT1O95170 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT1O95170 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CDRT1O95170 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDRT1O95170 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT1O95170 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT1O95170 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDRT1O95170 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT1O95170 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.46■□□□□ 0.55
CDRT1O95170 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDRT1O95170 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.46■□□□□ 0.55
CDRT1O95170 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms