Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 AC003957.1-201ENST00000625108 2673 ntBASIC18.58■□□□□ 0.57
UBL3O95164 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL3O95164 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL3O95164 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL3O95164 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL3O95164 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.58■□□□□ 0.57
UBL3O95164 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
UBL3O95164 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL3O95164 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
UBL3O95164 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL3O95164 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
UBL3O95164 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.58■□□□□ 0.56
UBL3O95164 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL3O95164 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL3O95164 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL3O95164 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
UBL3O95164 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
UBL3O95164 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.58■□□□□ 0.56
UBL3O95164 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL3O95164 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL3O95164 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.57■□□□□ 0.56
UBL3O95164 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.57■□□□□ 0.56
UBL3O95164 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.57■□□□□ 0.56
UBL3O95164 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
UBL3O95164 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.57■□□□□ 0.56
UBL3O95164 AC034268.1-201ENST00000441047 882 ntBASIC18.57■□□□□ 0.56
UBL3O95164 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.57■□□□□ 0.56
UBL3O95164 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UBL3O95164 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.57■□□□□ 0.56
UBL3O95164 AC003102.1-202ENST00000563394 1796 ntBASIC18.57■□□□□ 0.56
UBL3O95164 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 KRT87P-202ENST00000534226 1464 ntBASIC18.57■□□□□ 0.56
UBL3O95164 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.57■□□□□ 0.56
UBL3O95164 FEM1AP1-201ENST00000431297 1995 ntBASIC18.57■□□□□ 0.56
UBL3O95164 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.57■□□□□ 0.56
UBL3O95164 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL3O95164 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.56■□□□□ 0.56
UBL3O95164 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
UBL3O95164 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
UBL3O95164 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.56■□□□□ 0.56
UBL3O95164 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
UBL3O95164 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.56■□□□□ 0.56
UBL3O95164 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UBL3O95164 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBL3O95164 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.55■□□□□ 0.56
UBL3O95164 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
UBL3O95164 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
UBL3O95164 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.55■□□□□ 0.56
UBL3O95164 MIR935-201ENST00000401179 91 ntBASIC18.55■□□□□ 0.56
UBL3O95164 AC026271.2-201ENST00000428091 497 ntBASIC18.55■□□□□ 0.56
UBL3O95164 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.55■□□□□ 0.56
UBL3O95164 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL3O95164 AC026471.6-201ENST00000622954 1905 ntBASIC18.55■□□□□ 0.56
UBL3O95164 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBL3O95164 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL3O95164 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL3O95164 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.54■□□□□ 0.56
UBL3O95164 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UBL3O95164 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.54■□□□□ 0.56
UBL3O95164 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.54■□□□□ 0.56
UBL3O95164 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.54■□□□□ 0.56
UBL3O95164 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.54■□□□□ 0.56
UBL3O95164 AC087623.3-201ENST00000607047 1098 ntBASIC18.54■□□□□ 0.56
UBL3O95164 MIR5787-201ENST00000611784 55 ntBASIC18.54■□□□□ 0.56
UBL3O95164 RNF165-205ENST00000588679 2904 ntBASIC18.54■□□□□ 0.56
UBL3O95164 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
UBL3O95164 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL3O95164 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL3O95164 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.54■□□□□ 0.56
UBL3O95164 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UBL3O95164 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBL3O95164 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL3O95164 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms