Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ESRRAP1-201ENST00000400596 1257 ntBASIC32.69■■■□□ 2.82
PCF11O94913 LSM12P1-201ENST00000411836 588 ntBASIC32.69■■■□□ 2.82
PCF11O94913 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PCF11O94913 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC32.69■■■□□ 2.82
PCF11O94913 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PCF11O94913 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC32.68■■■□□ 2.82
PCF11O94913 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PCF11O94913 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
PCF11O94913 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.68■■■□□ 2.82
PCF11O94913 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PCF11O94913 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
PCF11O94913 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
PCF11O94913 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PCF11O94913 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
PCF11O94913 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
PCF11O94913 ME2-206ENST00000638410 2289 ntTSL 5 BASIC32.67■■■□□ 2.82
PCF11O94913 ME2-210ENST00000639255 2262 ntTSL 5 BASIC32.67■■■□□ 2.82
PCF11O94913 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PCF11O94913 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
PCF11O94913 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC32.67■■■□□ 2.82
PCF11O94913 NME6-213ENST00000451657 871 ntTSL 2 BASIC32.67■■■□□ 2.82
PCF11O94913 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC32.67■■■□□ 2.82
PCF11O94913 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PCF11O94913 KLF2-202ENST00000592003 564 ntTSL 3 BASIC32.67■■■□□ 2.82
PCF11O94913 AC006058.3-201ENST00000606217 1069 ntBASIC32.67■■■□□ 2.82
PCF11O94913 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC32.67■■■□□ 2.82
PCF11O94913 AC233723.2-201ENST00000623798 2106 ntBASIC32.67■■■□□ 2.82
PCF11O94913 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
PCF11O94913 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
PCF11O94913 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
PCF11O94913 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PCF11O94913 ECEL1P1-201ENST00000373592 1742 ntBASIC32.66■■■□□ 2.82
PCF11O94913 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC32.66■■■□□ 2.82
PCF11O94913 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC32.66■■■□□ 2.82
PCF11O94913 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
PCF11O94913 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC32.66■■■□□ 2.82
PCF11O94913 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PCF11O94913 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC32.65■■■□□ 2.82
PCF11O94913 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PCF11O94913 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PCF11O94913 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PCF11O94913 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PCF11O94913 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC32.65■■■□□ 2.82
PCF11O94913 AC026366.1-201ENST00000488803 879 ntBASIC32.65■■■□□ 2.82
PCF11O94913 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC32.65■■■□□ 2.82
PCF11O94913 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PCF11O94913 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
PCF11O94913 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
PCF11O94913 AC087633.2-202ENST00000565166 1439 ntBASIC32.64■■■□□ 2.82
PCF11O94913 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
PCF11O94913 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PCF11O94913 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.64■■■□□ 2.82
PCF11O94913 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
PCF11O94913 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC32.64■■■□□ 2.82
PCF11O94913 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC32.64■■■□□ 2.82
PCF11O94913 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCF11O94913 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCF11O94913 FAM210CP-201ENST00000445714 574 ntBASIC32.63■■■□□ 2.81
PCF11O94913 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC32.63■■■□□ 2.81
PCF11O94913 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
PCF11O94913 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCF11O94913 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCF11O94913 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCF11O94913 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCF11O94913 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCF11O94913 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC32.62■■■□□ 2.81
PCF11O94913 MMAB-206ENST00000540016 945 ntTSL 3 BASIC32.62■■■□□ 2.81
PCF11O94913 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.62■■■□□ 2.81
PCF11O94913 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCF11O94913 MFF-203ENST00000349901 1716 ntTSL 2 BASIC32.62■■■□□ 2.81
PCF11O94913 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC32.62■■■□□ 2.81
PCF11O94913 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC32.62■■■□□ 2.81
PCF11O94913 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCF11O94913 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC32.62■■■□□ 2.81
PCF11O94913 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCF11O94913 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCF11O94913 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCF11O94913 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PCF11O94913 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC32.62■■■□□ 2.81
PCF11O94913 IRX5-204ENST00000560154 879 ntTSL 5 BASIC32.62■■■□□ 2.81
PCF11O94913 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PCF11O94913 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
PCF11O94913 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
PCF11O94913 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PCF11O94913 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
PCF11O94913 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC32.61■■■□□ 2.81
PCF11O94913 PNMA6B-201ENST00000538162 1200 ntBASIC32.61■■■□□ 2.81
PCF11O94913 AL589743.5-201ENST00000616611 1050 ntBASIC32.61■■■□□ 2.81
PCF11O94913 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCF11O94913 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms