Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLPXO76031 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLPXO76031 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.82■□□□□ 0.6
CLPXO76031 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CLPXO76031 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPXO76031 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.82■□□□□ 0.6
CLPXO76031 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPXO76031 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.82■□□□□ 0.6
CLPXO76031 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.82■□□□□ 0.6
CLPXO76031 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CLPXO76031 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPXO76031 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPXO76031 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.82■□□□□ 0.6
CLPXO76031 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CLPXO76031 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLPXO76031 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLPXO76031 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLPXO76031 AC027702.1-201ENST00000563810 1770 ntBASIC18.81■□□□□ 0.6
CLPXO76031 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLPXO76031 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.81■□□□□ 0.6
CLPXO76031 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.81■□□□□ 0.6
CLPXO76031 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.81■□□□□ 0.6
CLPXO76031 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLPXO76031 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLPXO76031 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.81■□□□□ 0.6
CLPXO76031 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLPXO76031 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CLPXO76031 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLPXO76031 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLPXO76031 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLPXO76031 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPXO76031 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.8■□□□□ 0.6
CLPXO76031 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPXO76031 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.8■□□□□ 0.6
CLPXO76031 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.8■□□□□ 0.6
CLPXO76031 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.8■□□□□ 0.6
CLPXO76031 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPXO76031 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.8■□□□□ 0.6
CLPXO76031 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.8■□□□□ 0.6
CLPXO76031 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPXO76031 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.8■□□□□ 0.6
CLPXO76031 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPXO76031 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.8■□□□□ 0.6
CLPXO76031 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
CLPXO76031 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLPXO76031 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPXO76031 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 AC020907.5-201ENST00000624372 1936 ntBASIC18.79■□□□□ 0.6
CLPXO76031 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPXO76031 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.79■□□□□ 0.6
CLPXO76031 UNC93B8-201ENST00000511903 705 ntBASIC18.79■□□□□ 0.6
CLPXO76031 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPXO76031 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.79■□□□□ 0.6
CLPXO76031 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPXO76031 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLPXO76031 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPXO76031 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
CLPXO76031 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.79■□□□□ 0.6
CLPXO76031 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLPXO76031 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPXO76031 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.79■□□□□ 0.6
CLPXO76031 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.78■□□□□ 0.6
CLPXO76031 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.78■□□□□ 0.6
CLPXO76031 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLPXO76031 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLPXO76031 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 KRT16P3-201ENST00000439127 1283 ntBASIC18.78■□□□□ 0.6
CLPXO76031 AC092028.1-203ENST00000608262 953 ntBASIC18.78■□□□□ 0.6
CLPXO76031 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.78■□□□□ 0.6
CLPXO76031 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.78■□□□□ 0.6
CLPXO76031 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLPXO76031 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLPXO76031 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLPXO76031 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
CLPXO76031 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLPXO76031 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLPXO76031 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPXO76031 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms