Protein–RNA interactions for Protein: O75935

DCTN3, Dynactin subunit 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3O75935 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
DCTN3O75935 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DCTN3O75935 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DCTN3O75935 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DCTN3O75935 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DCTN3O75935 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DCTN3O75935 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.41■□□□□ 0.86
DCTN3O75935 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DCTN3O75935 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
DCTN3O75935 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DCTN3O75935 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DCTN3O75935 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DCTN3O75935 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DCTN3O75935 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DCTN3O75935 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
DCTN3O75935 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.4■□□□□ 0.86
DCTN3O75935 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DCTN3O75935 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.4■□□□□ 0.86
DCTN3O75935 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.4■□□□□ 0.86
DCTN3O75935 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
DCTN3O75935 MIR4508-201ENST00000584178 70 ntBASIC20.4■□□□□ 0.86
DCTN3O75935 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DCTN3O75935 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
DCTN3O75935 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
DCTN3O75935 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
DCTN3O75935 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
DCTN3O75935 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DCTN3O75935 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
DCTN3O75935 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.39■□□□□ 0.85
DCTN3O75935 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.39■□□□□ 0.85
DCTN3O75935 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.39■□□□□ 0.85
DCTN3O75935 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.39■□□□□ 0.85
DCTN3O75935 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
DCTN3O75935 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.39■□□□□ 0.85
DCTN3O75935 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCTN3O75935 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DCTN3O75935 AC098818.2-201ENST00000564925 2320 ntBASIC20.38■□□□□ 0.85
DCTN3O75935 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCTN3O75935 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCTN3O75935 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.38■□□□□ 0.85
DCTN3O75935 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCTN3O75935 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCTN3O75935 AC010980.1-201ENST00000587192 1142 ntBASIC20.38■□□□□ 0.85
DCTN3O75935 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCTN3O75935 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCTN3O75935 AC116562.4-201ENST00000641316 2276 ntBASIC20.38■□□□□ 0.85
DCTN3O75935 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCTN3O75935 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
DCTN3O75935 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 AC133637.1-201ENST00000624115 1537 ntBASIC20.37■□□□□ 0.85
DCTN3O75935 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.37■□□□□ 0.85
DCTN3O75935 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.37■□□□□ 0.85
DCTN3O75935 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.37■□□□□ 0.85
DCTN3O75935 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.37■□□□□ 0.85
DCTN3O75935 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
DCTN3O75935 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
DCTN3O75935 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCTN3O75935 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
DCTN3O75935 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCTN3O75935 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
DCTN3O75935 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DCTN3O75935 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DCTN3O75935 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCTN3O75935 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCTN3O75935 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DCTN3O75935 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCTN3O75935 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.36■□□□□ 0.85
DCTN3O75935 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.36■□□□□ 0.85
DCTN3O75935 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.36■□□□□ 0.85
DCTN3O75935 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.36■□□□□ 0.85
DCTN3O75935 Z92544.1-202ENST00000571933 1220 ntBASIC20.36■□□□□ 0.85
DCTN3O75935 AL451085.2-201ENST00000605085 799 ntBASIC20.36■□□□□ 0.85
DCTN3O75935 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCTN3O75935 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
DCTN3O75935 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DCTN3O75935 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCTN3O75935 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.36■□□□□ 0.85
DCTN3O75935 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
DCTN3O75935 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCTN3O75935 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCTN3O75935 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCTN3O75935 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms