Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SUPT3HO75486 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SUPT3HO75486 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
SUPT3HO75486 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SUPT3HO75486 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SUPT3HO75486 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SUPT3HO75486 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.53■□□□□ 0.88
SUPT3HO75486 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.53■□□□□ 0.88
SUPT3HO75486 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.53■□□□□ 0.88
SUPT3HO75486 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SUPT3HO75486 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUPT3HO75486 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUPT3HO75486 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUPT3HO75486 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SUPT3HO75486 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUPT3HO75486 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SUPT3HO75486 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.53■□□□□ 0.88
SUPT3HO75486 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.52■□□□□ 0.88
SUPT3HO75486 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.52■□□□□ 0.88
SUPT3HO75486 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.52■□□□□ 0.88
SUPT3HO75486 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.52■□□□□ 0.88
SUPT3HO75486 AL354811.1-201ENST00000610286 706 ntBASIC20.52■□□□□ 0.88
SUPT3HO75486 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 AL157384.1-201ENST00000445995 2473 ntBASIC20.52■□□□□ 0.88
SUPT3HO75486 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUPT3HO75486 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SUPT3HO75486 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SUPT3HO75486 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SUPT3HO75486 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SUPT3HO75486 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.51■□□□□ 0.87
SUPT3HO75486 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.51■□□□□ 0.87
SUPT3HO75486 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.51■□□□□ 0.87
SUPT3HO75486 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.51■□□□□ 0.87
SUPT3HO75486 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.51■□□□□ 0.87
SUPT3HO75486 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SUPT3HO75486 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.51■□□□□ 0.87
SUPT3HO75486 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.51■□□□□ 0.87
SUPT3HO75486 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUPT3HO75486 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SUPT3HO75486 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.5■□□□□ 0.87
SUPT3HO75486 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.5■□□□□ 0.87
SUPT3HO75486 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SUPT3HO75486 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.5■□□□□ 0.87
SUPT3HO75486 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.5■□□□□ 0.87
SUPT3HO75486 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.5■□□□□ 0.87
SUPT3HO75486 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.5■□□□□ 0.87
SUPT3HO75486 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.5■□□□□ 0.87
SUPT3HO75486 MIR6084-201ENST00000622012 110 ntBASIC20.5■□□□□ 0.87
SUPT3HO75486 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.5■□□□□ 0.87
SUPT3HO75486 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.5■□□□□ 0.87
SUPT3HO75486 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SUPT3HO75486 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SUPT3HO75486 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.5■□□□□ 0.87
SUPT3HO75486 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SUPT3HO75486 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.49■□□□□ 0.87
SUPT3HO75486 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.49■□□□□ 0.87
SUPT3HO75486 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SUPT3HO75486 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.49■□□□□ 0.87
SUPT3HO75486 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.49■□□□□ 0.87
SUPT3HO75486 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.49■□□□□ 0.87
SUPT3HO75486 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SUPT3HO75486 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SUPT3HO75486 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.48■□□□□ 0.87
SUPT3HO75486 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
SUPT3HO75486 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.48■□□□□ 0.87
SUPT3HO75486 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms