Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.16■□□□□ 0.98
PRAMEF11O60813 RAP2CP1-201ENST00000605103 478 ntBASIC21.16■□□□□ 0.98
PRAMEF11O60813 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF11O60813 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF11O60813 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PRAMEF11O60813 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF11O60813 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF11O60813 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF11O60813 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF11O60813 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF11O60813 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF11O60813 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF11O60813 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF11O60813 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF11O60813 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF11O60813 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF11O60813 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PRAMEF11O60813 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF11O60813 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PRAMEF11O60813 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRAMEF11O60813 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PRAMEF11O60813 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.14■□□□□ 0.98
PRAMEF11O60813 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.14■□□□□ 0.97
PRAMEF11O60813 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PRAMEF11O60813 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF11O60813 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.14■□□□□ 0.97
PRAMEF11O60813 AC007322.1-201ENST00000426983 750 ntBASIC21.14■□□□□ 0.97
PRAMEF11O60813 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.14■□□□□ 0.97
PRAMEF11O60813 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.14■□□□□ 0.97
PRAMEF11O60813 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.14■□□□□ 0.97
PRAMEF11O60813 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.14■□□□□ 0.97
PRAMEF11O60813 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.14■□□□□ 0.97
PRAMEF11O60813 AC005229.4-201ENST00000610085 2198 ntBASIC21.14■□□□□ 0.97
PRAMEF11O60813 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF11O60813 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF11O60813 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF11O60813 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRAMEF11O60813 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PRAMEF11O60813 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PRAMEF11O60813 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PRAMEF11O60813 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF11O60813 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PRAMEF11O60813 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF11O60813 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF11O60813 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PRAMEF11O60813 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF11O60813 AC026185.1-201ENST00000445748 174 ntBASIC21.12■□□□□ 0.97
PRAMEF11O60813 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF11O60813 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.12■□□□□ 0.97
PRAMEF11O60813 AL591742.1-201ENST00000604433 565 ntBASIC21.12■□□□□ 0.97
PRAMEF11O60813 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF11O60813 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF11O60813 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF11O60813 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF11O60813 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF11O60813 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
PRAMEF11O60813 AC068338.2-201ENST00000563278 1430 ntBASIC21.12■□□□□ 0.97
PRAMEF11O60813 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF11O60813 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF11O60813 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF11O60813 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF11O60813 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF11O60813 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 AL162412.1-201ENST00000567129 965 ntBASIC21.11■□□□□ 0.97
PRAMEF11O60813 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.11■□□□□ 0.97
PRAMEF11O60813 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PRAMEF11O60813 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF11O60813 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF11O60813 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF11O60813 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.1■□□□□ 0.97
PRAMEF11O60813 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PRAMEF11O60813 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF11O60813 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF11O60813 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
PRAMEF11O60813 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms