Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
HCN1O60741 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN1O60741 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN1O60741 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.37■□□□□ 0.69
HCN1O60741 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.37■□□□□ 0.69
HCN1O60741 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN1O60741 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.37■□□□□ 0.69
HCN1O60741 AC080038.1-201ENST00000611274 1154 ntBASIC19.37■□□□□ 0.69
HCN1O60741 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.37■□□□□ 0.69
HCN1O60741 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.37■□□□□ 0.69
HCN1O60741 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.36■□□□□ 0.69
HCN1O60741 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 BID-214ENST00000617586 542 ntTSL 5 BASIC19.36■□□□□ 0.69
HCN1O60741 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.36■□□□□ 0.69
HCN1O60741 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.36■□□□□ 0.69
HCN1O60741 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN1O60741 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN1O60741 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HCN1O60741 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HCN1O60741 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.35■□□□□ 0.69
HCN1O60741 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.35■□□□□ 0.69
HCN1O60741 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN1O60741 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCN1O60741 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN1O60741 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.35■□□□□ 0.69
HCN1O60741 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN1O60741 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCN1O60741 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN1O60741 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCN1O60741 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN1O60741 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN1O60741 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN1O60741 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCN1O60741 AC104187.1-201ENST00000607510 612 ntBASIC19.34■□□□□ 0.69
HCN1O60741 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.34■□□□□ 0.69
HCN1O60741 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN1O60741 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN1O60741 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HCN1O60741 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
HCN1O60741 FEM1AP4-201ENST00000443167 1987 ntBASIC19.33■□□□□ 0.69
HCN1O60741 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCN1O60741 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.33■□□□□ 0.69
HCN1O60741 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCN1O60741 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCN1O60741 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
HCN1O60741 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN1O60741 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN1O60741 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.33■□□□□ 0.68
HCN1O60741 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HCN1O60741 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.33■□□□□ 0.68
HCN1O60741 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.33■□□□□ 0.68
HCN1O60741 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.33■□□□□ 0.68
HCN1O60741 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN1O60741 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HCN1O60741 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN1O60741 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HCN1O60741 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HCN1O60741 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCN1O60741 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.32■□□□□ 0.68
HCN1O60741 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.32■□□□□ 0.68
HCN1O60741 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HCN1O60741 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.32■□□□□ 0.68
HCN1O60741 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HCN1O60741 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.32■□□□□ 0.68
HCN1O60741 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCN1O60741 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HCN1O60741 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HCN1O60741 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.32■□□□□ 0.68
HCN1O60741 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms