Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC28A2O43868 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC28A2O43868 AL596275.1-201ENST00000423464 877 ntBASIC19.98■□□□□ 0.79
SLC28A2O43868 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SLC28A2O43868 AF201337.1-201ENST00000520239 748 ntBASIC19.98■□□□□ 0.79
SLC28A2O43868 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC28A2O43868 AC098934.4-201ENST00000564127 592 ntBASIC19.98■□□□□ 0.79
SLC28A2O43868 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.98■□□□□ 0.79
SLC28A2O43868 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC28A2O43868 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC28A2O43868 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC28A2O43868 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC28A2O43868 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC28A2O43868 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC28A2O43868 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
SLC28A2O43868 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC28A2O43868 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 DUSP5P2-201ENST00000426873 1033 ntBASIC19.97■□□□□ 0.79
SLC28A2O43868 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC28A2O43868 DUX4L16-201ENST00000555130 1264 ntBASIC19.97■□□□□ 0.79
SLC28A2O43868 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC28A2O43868 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC28A2O43868 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC28A2O43868 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC28A2O43868 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC28A2O43868 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 RPS2P4-201ENST00000476944 856 ntBASIC19.96■□□□□ 0.79
SLC28A2O43868 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.96■□□□□ 0.79
SLC28A2O43868 AC105036.2-201ENST00000569468 176 ntBASIC19.96■□□□□ 0.79
SLC28A2O43868 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC28A2O43868 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC28A2O43868 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SLC28A2O43868 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC28A2O43868 Z98882.1-201ENST00000622160 2253 ntBASIC19.96■□□□□ 0.79
SLC28A2O43868 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC28A2O43868 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
SLC28A2O43868 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SLC28A2O43868 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLC28A2O43868 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLC28A2O43868 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 AC098590.1-201ENST00000468126 897 ntBASIC19.95■□□□□ 0.78
SLC28A2O43868 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC28A2O43868 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC28A2O43868 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLC28A2O43868 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC28A2O43868 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
SLC28A2O43868 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC28A2O43868 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC28A2O43868 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC28A2O43868 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC28A2O43868 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.94■□□□□ 0.78
SLC28A2O43868 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.94■□□□□ 0.78
SLC28A2O43868 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC28A2O43868 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC28A2O43868 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.94■□□□□ 0.78
SLC28A2O43868 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.94■□□□□ 0.78
SLC28A2O43868 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SLC28A2O43868 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC28A2O43868 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC28A2O43868 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC28A2O43868 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC28A2O43868 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC28A2O43868 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC28A2O43868 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC28A2O43868 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC28A2O43868 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC28A2O43868 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SLC28A2O43868 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC28A2O43868 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms