Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.89■□□□□ 0.45
PHF1O43189 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.89■□□□□ 0.45
PHF1O43189 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PHF1O43189 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.89■□□□□ 0.45
PHF1O43189 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 OR7E47P-201ENST00000546390 1422 ntBASIC17.89■□□□□ 0.45
PHF1O43189 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PHF1O43189 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
PHF1O43189 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.88■□□□□ 0.45
PHF1O43189 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.88■□□□□ 0.45
PHF1O43189 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PHF1O43189 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PHF1O43189 KRT18P6-201ENST00000555540 1265 ntBASIC17.88■□□□□ 0.45
PHF1O43189 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.88■□□□□ 0.45
PHF1O43189 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.88■□□□□ 0.45
PHF1O43189 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.88■□□□□ 0.45
PHF1O43189 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.88■□□□□ 0.45
PHF1O43189 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.88■□□□□ 0.45
PHF1O43189 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHF1O43189 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHF1O43189 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHF1O43189 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PHF1O43189 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.87■□□□□ 0.45
PHF1O43189 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.87■□□□□ 0.45
PHF1O43189 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.87■□□□□ 0.45
PHF1O43189 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHF1O43189 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.87■□□□□ 0.45
PHF1O43189 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHF1O43189 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.87■□□□□ 0.45
PHF1O43189 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.87■□□□□ 0.45
PHF1O43189 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHF1O43189 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.87■□□□□ 0.45
PHF1O43189 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PHF1O43189 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PHF1O43189 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PHF1O43189 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHF1O43189 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PHF1O43189 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PHF1O43189 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.86■□□□□ 0.45
PHF1O43189 Z98882.1-201ENST00000622160 2253 ntBASIC17.86■□□□□ 0.45
PHF1O43189 AC073130.3-201ENST00000624389 2278 ntBASIC17.86■□□□□ 0.45
PHF1O43189 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.86■□□□□ 0.45
PHF1O43189 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PHF1O43189 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.86■□□□□ 0.45
PHF1O43189 FAM201B-201ENST00000458407 597 ntBASIC17.86■□□□□ 0.45
PHF1O43189 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.86■□□□□ 0.45
PHF1O43189 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.86■□□□□ 0.45
PHF1O43189 AC142086.2-201ENST00000569753 217 ntBASIC17.86■□□□□ 0.45
PHF1O43189 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.86■□□□□ 0.45
PHF1O43189 AC004854.2-201ENST00000608450 1441 ntBASIC17.86■□□□□ 0.45
PHF1O43189 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.86■□□□□ 0.45
PHF1O43189 AP004607.7-201ENST00000527152 1677 ntBASIC17.86■□□□□ 0.45
PHF1O43189 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHF1O43189 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PHF1O43189 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.85■□□□□ 0.45
PHF1O43189 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PHF1O43189 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.85■□□□□ 0.45
PHF1O43189 AC009237.3-201ENST00000393279 1427 ntBASIC17.85■□□□□ 0.45
PHF1O43189 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHF1O43189 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.85■□□□□ 0.45
PHF1O43189 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PHF1O43189 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.85■□□□□ 0.45
PHF1O43189 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.85■□□□□ 0.45
PHF1O43189 AC079140.4-201ENST00000507448 529 ntBASIC17.85■□□□□ 0.45
PHF1O43189 AP004607.4-201ENST00000530158 1459 ntBASIC17.85■□□□□ 0.45
PHF1O43189 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.85■□□□□ 0.45
PHF1O43189 AC005224.4-201ENST00000583262 1652 ntBASIC17.85■□□□□ 0.45
PHF1O43189 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHF1O43189 AC011767.1-201ENST00000617410 1153 ntBASIC17.85■□□□□ 0.45
PHF1O43189 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PHF1O43189 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHF1O43189 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.85■□□□□ 0.45
PHF1O43189 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHF1O43189 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PHF1O43189 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHF1O43189 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PHF1O43189 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms