Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 RARRES2P4-201ENST00000514074 484 ntBASIC20.27■□□□□ 0.84
PPM1DO15297 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.27■□□□□ 0.84
PPM1DO15297 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.27■□□□□ 0.84
PPM1DO15297 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PPM1DO15297 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PPM1DO15297 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.27■□□□□ 0.84
PPM1DO15297 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PPM1DO15297 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.27■□□□□ 0.83
PPM1DO15297 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PPM1DO15297 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPM1DO15297 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.26■□□□□ 0.83
PPM1DO15297 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.26■□□□□ 0.83
PPM1DO15297 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPM1DO15297 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.26■□□□□ 0.83
PPM1DO15297 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.26■□□□□ 0.83
PPM1DO15297 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPM1DO15297 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPM1DO15297 AC091799.1-201ENST00000422823 811 ntBASIC20.26■□□□□ 0.83
PPM1DO15297 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.26■□□□□ 0.83
PPM1DO15297 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.26■□□□□ 0.83
PPM1DO15297 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPM1DO15297 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.26■□□□□ 0.83
PPM1DO15297 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPM1DO15297 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.26■□□□□ 0.83
PPM1DO15297 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPM1DO15297 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPM1DO15297 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPM1DO15297 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PPM1DO15297 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPM1DO15297 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPM1DO15297 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.25■□□□□ 0.83
PPM1DO15297 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PPM1DO15297 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.25■□□□□ 0.83
PPM1DO15297 BX276092.2-201ENST00000417668 665 ntBASIC20.25■□□□□ 0.83
PPM1DO15297 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.25■□□□□ 0.83
PPM1DO15297 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.25■□□□□ 0.83
PPM1DO15297 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.25■□□□□ 0.83
PPM1DO15297 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.25■□□□□ 0.83
PPM1DO15297 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPM1DO15297 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PPM1DO15297 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.25■□□□□ 0.83
PPM1DO15297 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.24■□□□□ 0.83
PPM1DO15297 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.24■□□□□ 0.83
PPM1DO15297 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 TSPY20P-201ENST00000450910 630 ntBASIC20.24■□□□□ 0.83
PPM1DO15297 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.24■□□□□ 0.83
PPM1DO15297 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.24■□□□□ 0.83
PPM1DO15297 AC010980.2-201ENST00000587099 1412 ntBASIC20.24■□□□□ 0.83
PPM1DO15297 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.24■□□□□ 0.83
PPM1DO15297 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.24■□□□□ 0.83
PPM1DO15297 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPM1DO15297 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPM1DO15297 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PPM1DO15297 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPM1DO15297 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPM1DO15297 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.23■□□□□ 0.83
PPM1DO15297 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.23■□□□□ 0.83
PPM1DO15297 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.23■□□□□ 0.83
PPM1DO15297 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.23■□□□□ 0.83
PPM1DO15297 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PPM1DO15297 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.23■□□□□ 0.83
PPM1DO15297 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PPM1DO15297 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PPM1DO15297 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPM1DO15297 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPM1DO15297 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.23■□□□□ 0.83
PPM1DO15297 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.22■□□□□ 0.83
PPM1DO15297 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 AC245052.3-201ENST00000450182 901 ntBASIC20.22■□□□□ 0.83
PPM1DO15297 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 AC092118.2-201ENST00000613495 667 ntBASIC20.22■□□□□ 0.83
PPM1DO15297 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPM1DO15297 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PPM1DO15297 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PPM1DO15297 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.21■□□□□ 0.83
PPM1DO15297 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PPM1DO15297 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PPM1DO15297 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPM1DO15297 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.21■□□□□ 0.83
PPM1DO15297 MIR4651-201ENST00000582622 73 ntBASIC20.21■□□□□ 0.83
PPM1DO15297 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPM1DO15297 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPM1DO15297 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PPM1DO15297 AC007375.3-201ENST00000600936 2314 ntBASIC20.21■□□□□ 0.83
PPM1DO15297 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms