Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.7■□□□□ 0.58
TNFSF11O14788 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF11O14788 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF11O14788 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF11O14788 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF11O14788 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFSF11O14788 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.7■□□□□ 0.58
TNFSF11O14788 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF11O14788 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF11O14788 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFSF11O14788 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF11O14788 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFSF11O14788 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF11O14788 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF11O14788 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF11O14788 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF11O14788 AC243732.1-201ENST00000612648 864 ntBASIC18.69■□□□□ 0.58
TNFSF11O14788 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNFSF11O14788 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF11O14788 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF11O14788 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF11O14788 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNFSF11O14788 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFSF11O14788 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TNFSF11O14788 AL024507.2-201ENST00000606070 2574 ntBASIC18.69■□□□□ 0.58
TNFSF11O14788 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF11O14788 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF11O14788 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TNFSF11O14788 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TNFSF11O14788 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFSF11O14788 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF11O14788 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TNFSF11O14788 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF11O14788 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF11O14788 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF11O14788 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TNFSF11O14788 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF11O14788 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.67■□□□□ 0.58
TNFSF11O14788 MIR663A-201ENST00000385250 93 ntBASIC18.67■□□□□ 0.58
TNFSF11O14788 AC006970.2-201ENST00000450065 779 ntBASIC18.67■□□□□ 0.58
TNFSF11O14788 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF11O14788 AC005181.1-201ENST00000604782 1256 ntBASIC18.67■□□□□ 0.58
TNFSF11O14788 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TNFSF11O14788 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF11O14788 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF11O14788 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFSF11O14788 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TNFSF11O14788 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFSF11O14788 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TNFSF11O14788 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TNFSF11O14788 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF11O14788 CROCCP5-201ENST00000436658 830 ntBASIC18.66■□□□□ 0.58
TNFSF11O14788 AC007322.4-201ENST00000509611 723 ntBASIC18.66■□□□□ 0.58
TNFSF11O14788 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF11O14788 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TNFSF11O14788 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF11O14788 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF11O14788 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF11O14788 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFSF11O14788 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFSF11O14788 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TNFSF11O14788 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TNFSF11O14788 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF11O14788 AC026310.3-201ENST00000625186 2373 ntBASIC18.66■□□□□ 0.58
TNFSF11O14788 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFSF11O14788 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFSF11O14788 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFSF11O14788 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms