Protein–RNA interactions for Protein: O00505

KPNA3, Importin subunit alpha-4, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3O00505 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.94■□□□□ 0.94
KPNA3O00505 CDV3P1-201ENST00000471403 739 ntBASIC20.94■□□□□ 0.94
KPNA3O00505 MIR4758-201ENST00000577688 71 ntBASIC20.94■□□□□ 0.94
KPNA3O00505 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.94■□□□□ 0.94
KPNA3O00505 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
KPNA3O00505 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.94■□□□□ 0.94
KPNA3O00505 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.94■□□□□ 0.94
KPNA3O00505 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.94■□□□□ 0.94
KPNA3O00505 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA3O00505 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA3O00505 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA3O00505 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA3O00505 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA3O00505 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA3O00505 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA3O00505 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.93■□□□□ 0.94
KPNA3O00505 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KPNA3O00505 BX276092.2-201ENST00000417668 665 ntBASIC20.93■□□□□ 0.94
KPNA3O00505 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.93■□□□□ 0.94
KPNA3O00505 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA3O00505 AC098934.4-201ENST00000564127 592 ntBASIC20.93■□□□□ 0.94
KPNA3O00505 AC133041.1-202ENST00000642053 222 ntBASIC20.93■□□□□ 0.94
KPNA3O00505 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA3O00505 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.93■□□□□ 0.94
KPNA3O00505 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA3O00505 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.93■□□□□ 0.94
KPNA3O00505 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA3O00505 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA3O00505 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
KPNA3O00505 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KPNA3O00505 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KPNA3O00505 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
KPNA3O00505 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA3O00505 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.92■□□□□ 0.94
KPNA3O00505 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.92■□□□□ 0.94
KPNA3O00505 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.92■□□□□ 0.94
KPNA3O00505 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.92■□□□□ 0.94
KPNA3O00505 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.92■□□□□ 0.94
KPNA3O00505 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.92■□□□□ 0.94
KPNA3O00505 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KPNA3O00505 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA3O00505 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA3O00505 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA3O00505 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA3O00505 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA3O00505 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA3O00505 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA3O00505 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KPNA3O00505 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.91■□□□□ 0.94
KPNA3O00505 FBXW4P1-201ENST00000426721 2239 ntBASIC20.91■□□□□ 0.94
KPNA3O00505 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.91■□□□□ 0.94
KPNA3O00505 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.91■□□□□ 0.94
KPNA3O00505 AC010980.2-201ENST00000587099 1412 ntBASIC20.91■□□□□ 0.94
KPNA3O00505 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
KPNA3O00505 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KPNA3O00505 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
KPNA3O00505 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
KPNA3O00505 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KPNA3O00505 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KPNA3O00505 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.9■□□□□ 0.94
KPNA3O00505 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KPNA3O00505 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.9■□□□□ 0.94
KPNA3O00505 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
KPNA3O00505 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA3O00505 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
KPNA3O00505 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
KPNA3O00505 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KPNA3O00505 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KPNA3O00505 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.89■□□□□ 0.94
KPNA3O00505 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KPNA3O00505 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
KPNA3O00505 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
KPNA3O00505 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KPNA3O00505 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA3O00505 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA3O00505 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA3O00505 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA3O00505 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA3O00505 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA3O00505 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
KPNA3O00505 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.89■□□□□ 0.93
KPNA3O00505 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.89■□□□□ 0.93
KPNA3O00505 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.89■□□□□ 0.93
KPNA3O00505 FAM21FP-204ENST00000608637 956 ntBASIC20.89■□□□□ 0.93
KPNA3O00505 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA3O00505 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.89■□□□□ 0.93
KPNA3O00505 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA3O00505 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
KPNA3O00505 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.88■□□□□ 0.93
KPNA3O00505 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KPNA3O00505 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms