Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3BM21 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3BM21 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H3BM21 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
H3BM21 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.71■□□□□ 0.91
H3BM21 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.71■□□□□ 0.91
H3BM21 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3BM21 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3BM21 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.71■□□□□ 0.91
H3BM21 AC244015.2-201ENST00000616358 1861 ntBASIC20.71■□□□□ 0.91
H3BM21 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.7■□□□□ 0.9
H3BM21 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.7■□□□□ 0.9
H3BM21 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.7■□□□□ 0.9
H3BM21 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.7■□□□□ 0.9
H3BM21 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3BM21 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.7■□□□□ 0.9
H3BM21 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.7■□□□□ 0.9
H3BM21 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H3BM21 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.7■□□□□ 0.9
H3BM21 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.7■□□□□ 0.9
H3BM21 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
H3BM21 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.69■□□□□ 0.9
H3BM21 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.69■□□□□ 0.9
H3BM21 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.69■□□□□ 0.9
H3BM21 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.69■□□□□ 0.9
H3BM21 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.69■□□□□ 0.9
H3BM21 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
H3BM21 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.69■□□□□ 0.9
H3BM21 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
H3BM21 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
H3BM21 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
H3BM21 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.68■□□□□ 0.9
H3BM21 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.68■□□□□ 0.9
H3BM21 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.68■□□□□ 0.9
H3BM21 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
H3BM21 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.68■□□□□ 0.9
H3BM21 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.68■□□□□ 0.9
H3BM21 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H3BM21 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H3BM21 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
H3BM21 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
H3BM21 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.67■□□□□ 0.9
H3BM21 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3BM21 AL512625.2-201ENST00000417533 625 ntBASIC20.67■□□□□ 0.9
H3BM21 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.67■□□□□ 0.9
H3BM21 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.67■□□□□ 0.9
H3BM21 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
H3BM21 TMEM191A-211ENST00000637163 1067 ntBASIC20.67■□□□□ 0.9
H3BM21 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.67■□□□□ 0.9
H3BM21 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3BM21 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.67■□□□□ 0.9
H3BM21 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3BM21 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
H3BM21 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3BM21 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H3BM21 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.67■□□□□ 0.9
H3BM21 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
H3BM21 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.66■□□□□ 0.9
H3BM21 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
H3BM21 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.66■□□□□ 0.9
H3BM21 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.66■□□□□ 0.9
H3BM21 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 AL162412.1-201ENST00000567129 965 ntBASIC20.66■□□□□ 0.9
H3BM21 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
H3BM21 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3BM21 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms