Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 AC007375.3-201ENST00000600936 2314 ntBASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
YJEFN3A6XGL0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
YJEFN3A6XGL0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 AL591742.1-201ENST00000604433 565 ntBASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
YJEFN3A6XGL0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 AC006970.2-201ENST00000450065 779 ntBASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 AL049796.1-201ENST00000565336 1766 ntBASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YJEFN3A6XGL0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 CYP2T1P-201ENST00000432607 1285 ntBASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 AC016405.3-201ENST00000607710 860 ntBASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
YJEFN3A6XGL0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.71■■□□□ 1.07
YJEFN3A6XGL0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
YJEFN3A6XGL0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 AL162412.1-201ENST00000567129 965 ntBASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YJEFN3A6XGL0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms