Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.48■■□□□ 1.03
SRRM3A6NNA2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.48■■□□□ 1.03
SRRM3A6NNA2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.48■■□□□ 1.03
SRRM3A6NNA2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRRM3A6NNA2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.48■■□□□ 1.03
SRRM3A6NNA2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRRM3A6NNA2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SRRM3A6NNA2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.48■■□□□ 1.03
SRRM3A6NNA2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SRRM3A6NNA2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 LINC01529-204ENST00000636474 1715 ntBASIC21.46■■□□□ 1.03
SRRM3A6NNA2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.46■■□□□ 1.03
SRRM3A6NNA2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 NCF1B-203ENST00000435988 1254 ntBASIC21.46■■□□□ 1.03
SRRM3A6NNA2 CROCCP5-201ENST00000436658 830 ntBASIC21.46■■□□□ 1.03
SRRM3A6NNA2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRRM3A6NNA2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SRRM3A6NNA2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 C17orf82-201ENST00000623772 1530 ntBASIC21.45■■□□□ 1.02
SRRM3A6NNA2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 AC137761.2-201ENST00000561729 223 ntBASIC21.45■■□□□ 1.02
SRRM3A6NNA2 AC145350.3-201ENST00000569033 163 ntBASIC21.45■■□□□ 1.02
SRRM3A6NNA2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 AL049796.1-201ENST00000565336 1766 ntBASIC21.45■■□□□ 1.02
SRRM3A6NNA2 FP325331.1-202ENST00000623531 1380 ntBASIC21.45■■□□□ 1.02
SRRM3A6NNA2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRRM3A6NNA2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 AC009086.3-201ENST00000623486 1008 ntBASIC21.44■■□□□ 1.02
SRRM3A6NNA2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
SRRM3A6NNA2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 IGHV3-19-201ENST00000521488 291 ntBASIC21.43■■□□□ 1.02
SRRM3A6NNA2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SRRM3A6NNA2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms