Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 MIR6724-1-201ENST00000616420 92 ntBASIC21.25■□□□□ 0.99
SMIM23A6NLE4 MIR6724-2-201ENST00000616483 92 ntBASIC21.25■□□□□ 0.99
SMIM23A6NLE4 MIR6724-4-201ENST00000617390 92 ntBASIC21.25■□□□□ 0.99
SMIM23A6NLE4 MIR6724-3-201ENST00000622482 92 ntBASIC21.25■□□□□ 0.99
SMIM23A6NLE4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM23A6NLE4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.24■□□□□ 0.99
SMIM23A6NLE4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SMIM23A6NLE4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.24■□□□□ 0.99
SMIM23A6NLE4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.24■□□□□ 0.99
SMIM23A6NLE4 AC087289.5-201ENST00000586076 3175 ntBASIC21.24■□□□□ 0.99
SMIM23A6NLE4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM23A6NLE4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.24■□□□□ 0.99
SMIM23A6NLE4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM23A6NLE4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.23■□□□□ 0.99
SMIM23A6NLE4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.22■□□□□ 0.99
SMIM23A6NLE4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 AIRN-201ENST00000601203 4374 ntBASIC21.21■□□□□ 0.99
SMIM23A6NLE4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 AC121338.2-201ENST00000622535 1744 ntBASIC21.21■□□□□ 0.99
SMIM23A6NLE4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM23A6NLE4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
SMIM23A6NLE4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 UNC93B8-201ENST00000511903 705 ntBASIC21.2■□□□□ 0.98
SMIM23A6NLE4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM23A6NLE4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 AC020907.5-201ENST00000624372 1936 ntBASIC21.19■□□□□ 0.98
SMIM23A6NLE4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms