Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT1A5YKK6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT1A5YKK6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.09■□□□□ 0.81
CNOT1A5YKK6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT1A5YKK6 KRT18P68-201ENST00000392293 1000 ntBASIC20.09■□□□□ 0.81
CNOT1A5YKK6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.09■□□□□ 0.81
CNOT1A5YKK6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CNOT1A5YKK6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.09■□□□□ 0.81
CNOT1A5YKK6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CNOT1A5YKK6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT1A5YKK6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT1A5YKK6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.08■□□□□ 0.81
CNOT1A5YKK6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT1A5YKK6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT1A5YKK6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT1A5YKK6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT1A5YKK6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT1A5YKK6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CNOT1A5YKK6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT1A5YKK6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 UPK3BP1-201ENST00000428678 509 ntBASIC20.05■□□□□ 0.8
CNOT1A5YKK6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT1A5YKK6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 FAM21FP-204ENST00000608637 956 ntBASIC20.04■□□□□ 0.8
CNOT1A5YKK6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT1A5YKK6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms