Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TCRBV9S1A1TA0A576 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV9S1A1TA0A576 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TCRBV9S1A1TA0A576 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 PCDHAC2-203ENST00000615316 3011 ntBASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TCRBV9S1A1TA0A576 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 AP001330.3-201ENST00000520123 633 ntBASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 FP700111.2-201ENST00000619190 1892 ntBASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV9S1A1TA0A576 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 MIR572-201ENST00000384983 95 ntBASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 AC096631.2-201ENST00000436136 790 ntBASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 PBX2P1-201ENST00000493219 1291 ntBASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 EEF1DP3-203ENST00000566025 782 ntBASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 AC131212.1-201ENST00000613771 668 ntBASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
TCRBV9S1A1TA0A576 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms