Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CENPVL3A0A0U1RRI6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CENPVL3A0A0U1RRI6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
CENPVL3A0A0U1RRI6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 AC007322.3-201ENST00000426526 701 ntBASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CENPVL3A0A0U1RRI6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 AC100791.3-201ENST00000617619 330 ntBASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CENPVL3A0A0U1RRI6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CENPVL3A0A0U1RRI6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CENPVL3A0A0U1RRI6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CENPVL3A0A0U1RRI6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CENPVL3A0A0U1RRI6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CENPVL3A0A0U1RRI6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CENPVL3A0A0U1RRI6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CENPVL3A0A0U1RRI6 AL355472.2-201ENST00000422958 438 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms