Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 BX005040.4-201ENST00000637145 1518 ntBASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC105233.4-201ENST00000642045 216 ntBASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC008764.7-201ENST00000593779 1081 ntBASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC135279.3-201ENST00000610945 1311 ntBASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 FP700111.2-201ENST00000619190 1892 ntBASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AFG3L1P-217ENST00000557444 2447 ntBASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms