Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LOC102724428A0A0B4J2F2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LOC102724428A0A0B4J2F2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
LOC102724428A0A0B4J2F2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.71■■□□□ 1.87
LOC102724428A0A0B4J2F2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LOC102724428A0A0B4J2F2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.71■■□□□ 1.87
LOC102724428A0A0B4J2F2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LOC102724428A0A0B4J2F2 AC010542.4-201ENST00000563151 1910 ntBASIC26.71■■□□□ 1.87
LOC102724428A0A0B4J2F2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
LOC102724428A0A0B4J2F2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
LOC102724428A0A0B4J2F2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.7■■□□□ 1.87
LOC102724428A0A0B4J2F2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
LOC102724428A0A0B4J2F2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
LOC102724428A0A0B4J2F2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC068473.5-201ENST00000616428 2072 ntBASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
LOC102724428A0A0B4J2F2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 MIR1224-201ENST00000408193 85 ntBASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC105020.6-201ENST00000621523 1217 ntBASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.69■■□□□ 1.86
LOC102724428A0A0B4J2F2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
LOC102724428A0A0B4J2F2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LOC102724428A0A0B4J2F2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC012618.2-201ENST00000428058 849 ntBASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC233702.5-201ENST00000584107 538 ntBASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.66■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 LINC01023-201ENST00000606054 436 ntBASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.65■■□□□ 1.86
LOC102724428A0A0B4J2F2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 BX088651.1-201ENST00000540551 451 ntBASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.64■■□□□ 1.86
LOC102724428A0A0B4J2F2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms