Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-1A0A0B4J241 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-1A0A0B4J241 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 PCDHAC2-203ENST00000615316 3011 ntBASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 MIR3621-201ENST00000580529 85 ntBASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV13-1A0A0B4J241 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-1A0A0B4J241 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms