Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 AC020907.5-201ENST00000624372 1936 ntBASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 DUX4L9-201ENST00000449051 1259 ntBASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 MIR4281-201ENST00000580852 62 ntBASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV13-2A0A0B4J235 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 THA1P-201ENST00000590384 1145 ntBASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-2A0A0B4J235 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 AC005703.6-201ENST00000623265 1329 ntBASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-2A0A0B4J235 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAV13-2A0A0B4J235 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV13-2A0A0B4J235 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-2A0A0B4J235 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAV13-2A0A0B4J235 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-2A0A0B4J235 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAV13-2A0A0B4J235 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms