Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRBV6-7A0A0A0MS04 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.39■□□□□ 0.38
TRBV6-7A0A0A0MS04 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC006128.1-201ENST00000624704 1661 ntBASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 IGHV3-19-201ENST00000521488 291 ntBASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-7A0A0A0MS04 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC126544.1-201ENST00000580842 1059 ntBASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-7A0A0A0MS04 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC055733.4-201ENST00000638462 1354 ntBASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRBV6-7A0A0A0MS04 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC024257.2-201ENST00000549699 147 ntBASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 AL136162.1-201ENST00000607711 1078 ntBASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 PLK5-205ENST00000642079 1969 ntBASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-7A0A0A0MS04 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms