Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CINP-203ENST00000541568 572 ntTSL 5 BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 AC092115.2-201ENST00000562696 575 ntTSL 3 BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 AC012146.3-201ENST00000574352 490 ntTSL 3 BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 AC015688.7-201ENST00000580276 664 ntBASIC10.59□□□□□ -0.71
LMO3Q8TAP4 NDUFB1-206ENST00000605997 336 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 AL359921.2-201ENST00000608547 543 ntBASIC10.59□□□□□ -0.71
LMO3Q8TAP4 AL121590.1-201ENST00000621402 458 ntBASIC10.59□□□□□ -0.71
LMO3Q8TAP4 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 ASB11-202ENST00000380470 2748 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 PKMP2-201ENST00000412159 1677 ntBASIC10.59□□□□□ -0.71
LMO3Q8TAP4 NIPSNAP3B-201ENST00000374762 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 PCDHGA10-202ENST00000612503 4462 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LMO3Q8TAP4 AC099335.1-201ENST00000430498 1335 ntBASIC10.58□□□□□ -0.71
LMO3Q8TAP4 AC004381.2-201ENST00000637768 1329 ntBASIC10.58□□□□□ -0.71
LMO3Q8TAP4 PRAMEF30P-201ENST00000438176 1417 ntBASIC10.58□□□□□ -0.72
LMO3Q8TAP4 NFRKB-201ENST00000446488 5093 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 AC074194.2-201ENST00000636429 2348 ntBASIC10.58□□□□□ -0.72
LMO3Q8TAP4 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 TMEM254-AS1-201ENST00000412298 3121 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 MOGAT2-203ENST00000526712 3204 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 CCDC33-203ENST00000398814 2787 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 AP000265.1-201ENST00000565959 1782 ntBASIC10.58□□□□□ -0.72
LMO3Q8TAP4 STARD6-203ENST00000581310 1371 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 SNX12-201ENST00000276105 720 ntAPPRIS ALT1 TSL 3 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 OR56B3P-201ENST00000316517 947 ntBASIC10.58□□□□□ -0.72
LMO3Q8TAP4 PRRG3-202ENST00000370354 650 ntTSL 3 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 LGALS14-202ENST00000392052 774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 CHCHD2P5-201ENST00000421414 400 ntBASIC10.58□□□□□ -0.72
LMO3Q8TAP4 AL731533.1-201ENST00000439575 608 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 LINC01304-203ENST00000453880 812 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 GAS5-224ENST00000454068 688 ntTSL 5 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 LYRM4-207ENST00000480566 941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 KCTD21-AS1-202ENST00000523626 555 ntTSL 4 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 ZFHX2-AS1-203ENST00000556354 931 ntTSL 3 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 ANAPC11-205ENST00000571570 581 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 EIF3K-208ENST00000588934 501 ntTSL 3 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 FAAP24-205ENST00000590281 865 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 FAM197Y2-203ENST00000598351 776 ntBASIC10.58□□□□□ -0.72
LMO3Q8TAP4 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 AC007378.1-201ENST00000609765 478 ntBASIC10.58□□□□□ -0.72
LMO3Q8TAP4 CCL4L2-210ENST00000610565 785 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 THRB-AS1-209ENST00000628911 850 ntTSL 5 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 ANO1-209ENST00000531349 3552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 SSPN-202ENST00000422622 4348 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 ZNF423-202ENST00000535559 4201 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 PYHIN1-205ENST00000392254 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 VWA5A-202ENST00000392744 2691 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 GCNT1-201ENST00000376730 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 STRAP-201ENST00000025399 1442 ntTSL 2 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 NCALD-225ENST00000522951 1315 ntTSL 5 BASIC10.58□□□□□ -0.72
LMO3Q8TAP4 PHACTR3-201ENST00000355648 2247 ntTSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ASH2LP2-201ENST00000453999 1561 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 BCL2L13-211ENST00000493680 2112 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 NPAP1P4-201ENST00000443325 3310 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 TRIM6-208ENST00000506134 1398 ntTSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 NDP-201ENST00000378062 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 KRTAP8-1-201ENST00000329621 556 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 CLEC4C-202ENST00000360345 970 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 RN7SKP249-201ENST00000365490 355 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 TMIGD3-202ENST00000369717 1150 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AL136968.1-201ENST00000403053 946 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC007179.2-205ENST00000412409 707 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 OGFRP1-203ENST00000446578 551 ntTSL 4 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ARL17B-202ENST00000450673 743 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC022140.1-202ENST00000507887 638 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 TRMT112P5-201ENST00000511173 334 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 LINC02216-201ENST00000513366 581 ntTSL 4 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 HPYR1-201ENST00000520457 982 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 CLEC4C-204ENST00000540085 860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 PRSS58-202ENST00000552471 1123 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 CSHL1-210ENST00000561003 880 ntTSL 2 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC119868.1-201ENST00000579307 336 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC092127.2-201ENST00000602862 601 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 AC134879.2-201ENST00000604178 389 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ZNF761-205ENST00000613950 646 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 JPX_1.1-201ENST00000614715 135 ntBASIC10.57□□□□□ -0.72
LMO3Q8TAP4 ZNF195-229ENST00000618467 440 ntTSL 5 BASIC10.57□□□□□ -0.72
LMO3Q8TAP4 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 350.6 ms