Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GTF2H3-214ENST00000618160 3252 ntTSL 5 BASIC9.18□□□□□ -0.94
P04436 WT1-AS_1.1-201ENST00000619639 109 ntBASIC9.18□□□□□ -0.94
P04436 AC000041.2-201ENST00000619824 151 ntBASIC9.18□□□□□ -0.94
P04436 AC069547.1-201ENST00000624562 1586 ntBASIC9.18□□□□□ -0.94
P04436 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P04436 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
P04436 ATAD1-201ENST00000308448 4640 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
P04436 AL590438.1-201ENST00000607061 3461 ntBASIC9.18□□□□□ -0.94
P04436 ATP1A3-207ENST00000543770 3427 ntTSL 2 BASIC9.18□□□□□ -0.94
P04436 RBBP8-204ENST00000399722 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04436 ALDH1L1-206ENST00000455064 3137 ntTSL 5 BASIC9.18□□□□□ -0.94
P04436 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04436 ASAP3-209ENST00000495646 2552 ntTSL 2 BASIC9.18□□□□□ -0.94
P04436 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 OR9A4-202ENST00000641559 2018 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04436 FBXL7-201ENST00000329673 3960 ntTSL 2 BASIC9.17□□□□□ -0.94
P04436 AC037441.1-202ENST00000511897 3879 ntTSL 2 BASIC9.17□□□□□ -0.94
P04436 AC023824.7-201ENST00000623041 5731 ntBASIC9.17□□□□□ -0.94
P04436 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 SNX29P2-202ENST00000507381 1857 ntTSL 5 BASIC9.17□□□□□ -0.94
P04436 C6orf222-201ENST00000437635 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 BRINP2-201ENST00000361539 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 KIF2A-201ENST00000381103 3360 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 FCHO1-216ENST00000596536 3204 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
P04436 LIAS-203ENST00000381846 1578 ntTSL 3 BASIC9.17□□□□□ -0.94
P04436 SEC14L1-201ENST00000392476 2957 ntAPPRIS ALT1 TSL 2 BASIC9.17□□□□□ -0.94
P04436 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 ITIH4-202ENST00000406595 2872 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
P04436 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 PFKFB1-204ENST00000614686 1353 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 GLA-201ENST00000218516 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC9.17□□□□□ -0.94
P04436 VWA5B1-202ENST00000375079 3859 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
P04436 KRTAP9-8-201ENST00000254072 960 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04436 FCAR-208ENST00000391726 609 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 OPN5-203ENST00000393699 1142 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
P04436 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
P04436 KRTAP9-3-201ENST00000411528 992 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04436 CABYR-205ENST00000415309 824 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 IFIT6P-201ENST00000418257 1194 ntBASIC9.17□□□□□ -0.94
P04436 AL512288.2-201ENST00000426041 367 ntBASIC9.17□□□□□ -0.94
P04436 RPSAP34-201ENST00000476193 736 ntBASIC9.17□□□□□ -0.94
P04436 AC093152.1-201ENST00000495684 564 ntTSL 5 BASIC9.17□□□□□ -0.94
P04436 OR10J7P-201ENST00000503933 934 ntBASIC9.17□□□□□ -0.94
P04436 LINC02216-201ENST00000513366 581 ntTSL 4 BASIC9.17□□□□□ -0.94
P04436 NANOGP1-201ENST00000525030 915 ntBASIC9.17□□□□□ -0.94
P04436 NANOG-202ENST00000526286 870 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 NANOGP8-201ENST00000528386 918 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04436 COA4-204ENST00000541455 1038 ntTSL 5 BASIC9.17□□□□□ -0.94
P04436 C1RL-211ENST00000545280 449 ntTSL 3 BASIC9.17□□□□□ -0.94
P04436 AC025030.1-201ENST00000548007 573 ntBASIC9.17□□□□□ -0.94
P04436 AC004858.1-201ENST00000554078 242 ntBASIC9.17□□□□□ -0.94
P04436 NANOGP7-201ENST00000554450 918 ntBASIC9.17□□□□□ -0.94
P04436 AC107241.1-201ENST00000560280 434 ntTSL 3 BASIC9.17□□□□□ -0.94
P04436 AC092123.1-201ENST00000565623 871 ntTSL 2 BASIC9.17□□□□□ -0.94
P04436 APOC1-201ENST00000586638 425 ntTSL 3 BASIC9.17□□□□□ -0.94
P04436 APOC1-205ENST00000589781 273 ntTSL 3 BASIC9.17□□□□□ -0.94
P04436 ZNF268-218ENST00000592241 686 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 AC116348.4-201ENST00000624127 348 ntBASIC9.17□□□□□ -0.94
P04436 AC092135.2-201ENST00000624702 506 ntBASIC9.17□□□□□ -0.94
P04436 NANOGP8-202ENST00000629403 870 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 AC091939.1-202ENST00000642039 795 ntBASIC9.17□□□□□ -0.94
P04436 AC073508.2-201ENST00000476049 2502 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
P04436 EFHC1-214ENST00000636107 3530 ntTSL 5 BASIC9.17□□□□□ -0.94
P04436 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
P04436 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC9.17□□□□□ -0.94
P04436 P4HA2-207ENST00000401867 3349 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
P04436 ASIC1-208ENST00000552438 3327 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 KPNA5-201ENST00000356348 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 CD226-206ENST00000581982 2157 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC9.17□□□□□ -0.94
P04436 ZSCAN31-209ENST00000439158 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 AL512274.1-201ENST00000562471 2027 ntBASIC9.17□□□□□ -0.94
P04436 MICAL3-202ENST00000383094 2963 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04436 XRCC6-204ENST00000405506 1958 ntTSL 5 BASIC9.17□□□□□ -0.94
P04436 CCDC87-201ENST00000333861 2908 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04436 PGM1-201ENST00000371083 2657 ntTSL 2 BASIC9.17□□□□□ -0.94
P04436 AC110079.1-201ENST00000567913 4395 ntTSL 5 BASIC9.17□□□□□ -0.94
P04436 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 GAPDHP72-203ENST00000638093 1602 ntTSL 5 BASIC9.16□□□□□ -0.94
P04436 ZNF823-201ENST00000341191 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 LRRN2-202ENST00000367176 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 BACH2-202ENST00000343122 3981 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
P04436 SPDYE3-201ENST00000332397 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 HAUS6P1-201ENST00000421150 1551 ntBASIC9.16□□□□□ -0.94
P04436 NHSL2-202ENST00000510661 3082 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 MAPK10-295ENST00000641274 2259 ntBASIC9.16□□□□□ -0.94
P04436 CD160-202ENST00000369288 1424 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 MIR345-201ENST00000362114 98 ntBASIC9.16□□□□□ -0.94
P04436 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC9.16□□□□□ -0.94
P04436 FAM192A-202ENST00000389447 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04436 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
P04436 AC006378.1-201ENST00000426193 563 ntTSL 4 BASIC9.16□□□□□ -0.94
P04436 AC022431.2-201ENST00000431789 536 ntTSL 4 BASIC9.16□□□□□ -0.94
P04436 AC093142.1-201ENST00000436725 349 ntBASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms