Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CCDC181-202ENST00000367806 1860 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 ZNF615-215ENST00000618487 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 CORO1C-212ENST00000549772 1710 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 RTP4-201ENST00000259030 1554 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 PRR23D2-201ENST00000528972 1587 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 PRR23D1-201ENST00000533250 1587 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 ASNSD1-201ENST00000260952 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 PEX5L-209ENST00000468741 2309 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 SETD4-206ENST00000399212 3258 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 EDA2R-201ENST00000253392 957 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 TRBV5-6-201ENST00000390375 384 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 MARCKSL1P1-201ENST00000412473 541 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 LINC00403-201ENST00000421423 545 ntTSL 2 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 RPL13AP6-201ENST00000430133 612 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 AC104333.3-201ENST00000449334 479 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 AL138976.1-201ENST00000494237 536 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 SNORA21B-201ENST00000516890 136 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 AP001981.1-201ENST00000531132 738 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 RN7SL577P-201ENST00000584532 303 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 ZNF227-210ENST00000589707 504 ntTSL 5 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 RPSAP57-201ENST00000590033 832 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 EMP3-206ENST00000597279 683 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 AC023300.2-201ENST00000611006 612 ntTSL 2 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 C11orf74-211ENST00000617650 937 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 ILK-216ENST00000627400 111 ntTSL 5 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 AL031430.1-201ENST00000642067 1039 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 TMEM254-AS1-201ENST00000412298 3121 ntTSL 2 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 TCTN3-202ENST00000371209 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 VWA5A-201ENST00000361352 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 AC020661.5-201ENST00000624853 1854 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 MRPS35-201ENST00000081029 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 ZNF814-213ENST00000597832 2090 ntTSL 2 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 AL603865.1-201ENST00000403062 1348 ntBASIC9.25□□□□□ -0.93
SNX18Q96RF0 CHRNA9-201ENST00000310169 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 CCDC181-201ENST00000367805 1914 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.25□□□□□ -0.93
SNX18Q96RF0 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SNX18Q96RF0 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 BLNK-201ENST00000224337 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 PCID2-201ENST00000246505 1786 ntTSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AL096817.1-201ENST00000623904 1775 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 MTMR7-208ENST00000521857 2158 ntTSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 MINDY3-201ENST00000277632 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC112512.1-201ENST00000398957 1428 ntTSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 ANKRD6-208ENST00000485637 1427 ntTSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 PLEKHM3-204ENST00000457206 3689 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 C1orf226-203ENST00000458626 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 SERPINB6-203ENST00000380524 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 PF4V1-201ENST00000226524 522 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 ELOB-201ENST00000262306 582 ntTSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 ZNF483-204ENST00000374374 800 ntTSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 BNIP1-204ENST00000393770 721 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 TRPM8-203ENST00000409625 722 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC013248.2-201ENST00000412454 459 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 AL356108.1-201ENST00000416510 675 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AL450344.3-201ENST00000430770 378 ntTSL 3 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 MIR205HG-204ENST00000431096 908 ntTSL 3 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 BMF-203ENST00000431415 492 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 CRP-205ENST00000437342 1063 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 TRAF3IP2-AS1-205ENST00000442928 548 ntTSL 4 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC113367.1-201ENST00000498453 532 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 FLJ42102-203ENST00000508543 460 ntTSL 3 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC147055.2-201ENST00000513659 595 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 FKBP1AP2-201ENST00000560953 283 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC008569.1-201ENST00000590626 252 ntTSL 3 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC063977.4-201ENST00000595913 872 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC011466.3-202ENST00000596839 681 ntTSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC011475.1-201ENST00000603599 965 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 IL31RA-208ENST00000611895 1171 ntTSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AL627230.8-201ENST00000613335 202 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC016708.1-201ENST00000607412 1909 ntTSL 2 BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms