Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC9.25□□□□□ -0.93
P04436 AL391094.1-201ENST00000612442 966 ntBASIC9.25□□□□□ -0.93
P04436 MIR6880-201ENST00000622851 62 ntBASIC9.25□□□□□ -0.93
P04436 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC9.25□□□□□ -0.93
P04436 ST3GAL5-254ENST00000640322 2368 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
P04436 QTRT2-201ENST00000281273 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
P04436 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.25□□□□□ -0.93
P04436 TTYH2-202ENST00000441391 3661 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
P04436 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC9.25□□□□□ -0.93
P04436 PPP1R11-202ENST00000376763 1464 ntTSL 3 BASIC9.25□□□□□ -0.93
P04436 C10orf67-201ENST00000323327 2799 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
P04436 ZNF774-202ENST00000379090 5613 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
P04436 ENO1P1-201ENST00000366587 1304 ntBASIC9.25□□□□□ -0.93
P04436 WEE1-201ENST00000299613 3436 ntTSL 2 BASIC9.25□□□□□ -0.93
P04436 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
P04436 RPL32-203ENST00000396957 1749 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
P04436 ITIH5-202ENST00000397146 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
P04436 AKNAD1-203ENST00000370001 3053 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
P04436 IFT122-205ENST00000431818 4414 ntTSL 2 BASIC9.25□□□□□ -0.93
P04436 AL355877.1-201ENST00000428812 2108 ntBASIC9.25□□□□□ -0.93
P04436 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC9.25□□□□□ -0.93
P04436 HAP1-202ENST00000341193 3880 ntTSL 2 BASIC9.25□□□□□ -0.93
P04436 AL592158.1-201ENST00000632210 4477 ntBASIC9.25□□□□□ -0.93
P04436 TTC26-210ENST00000495038 1599 ntTSL 2 BASIC9.24□□□□□ -0.93
P04436 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
P04436 CARMN-201ENST00000505254 3950 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC9.24□□□□□ -0.93
P04436 STXBP1-209ENST00000626539 3840 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 SCAMP5-201ENST00000361900 3427 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
P04436 MTFR1-201ENST00000262146 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
P04436 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
P04436 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 AL133367.1-201ENST00000568177 4063 ntBASIC9.24□□□□□ -0.93
P04436 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 FBXO18-202ENST00000379999 3702 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 SPG21-209ENST00000559199 2059 ntTSL 2 BASIC9.24□□□□□ -0.93
P04436 PDE9A-204ENST00000335512 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 CFAP97-202ENST00000458385 4852 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
P04436 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 RN7SKP134-201ENST00000363960 269 ntBASIC9.24□□□□□ -0.93
P04436 IGKV1D-42-201ENST00000390278 373 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
P04436 ATP5G1-202ENST00000393366 614 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 NXNP1-201ENST00000397383 1051 ntBASIC9.24□□□□□ -0.93
P04436 RPL10P11-201ENST00000414541 616 ntBASIC9.24□□□□□ -0.93
P04436 LINC00694-201ENST00000416124 729 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
P04436 AL022324.1-201ENST00000433457 663 ntBASIC9.24□□□□□ -0.93
P04436 AC245036.2-201ENST00000433549 287 ntBASIC9.24□□□□□ -0.93
P04436 AC114737.1-201ENST00000434531 453 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 VDAC1P12-201ENST00000451853 882 ntBASIC9.24□□□□□ -0.93
P04436 LINC01304-203ENST00000453880 812 ntTSL 2 BASIC9.24□□□□□ -0.93
P04436 CCDC162P-207ENST00000473454 547 ntTSL 4 BASIC9.24□□□□□ -0.93
P04436 AC005522.2-201ENST00000479299 453 ntTSL 3 BASIC9.24□□□□□ -0.93
P04436 AL133368.1-201ENST00000486273 814 ntBASIC9.24□□□□□ -0.93
P04436 AC109927.1-203ENST00000507038 421 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 PPIAP11-201ENST00000510729 493 ntBASIC9.24□□□□□ -0.93
P04436 BTNL8-207ENST00000511704 1260 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC9.24□□□□□ -0.93
P04436 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC9.24□□□□□ -0.93
P04436 AC022568.1-201ENST00000518222 833 ntTSL 4 BASIC9.24□□□□□ -0.93
P04436 AC021915.2-201ENST00000520496 635 ntTSL 2 BASIC9.24□□□□□ -0.93
P04436 AC027088.2-201ENST00000559870 916 ntTSL 3 BASIC9.24□□□□□ -0.93
P04436 AC096996.2-201ENST00000563906 426 ntTSL 3 BASIC9.24□□□□□ -0.93
P04436 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 MAGOH2P-201ENST00000580926 436 ntBASIC9.24□□□□□ -0.93
P04436 ORMDL3-208ENST00000584220 414 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 ZNF546-204ENST00000596894 714 ntTSL 3 BASIC9.24□□□□□ -0.93
P04436 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 AC091393.1-201ENST00000605088 598 ntBASIC9.24□□□□□ -0.93
P04436 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 AL157904.1-201ENST00000610171 383 ntBASIC9.24□□□□□ -0.93
P04436 AC022400.7-201ENST00000625041 1236 ntBASIC9.24□□□□□ -0.93
P04436 AC027369.1-201ENST00000640698 1105 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 PRICKLE1-205ENST00000548696 3635 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
P04436 C14orf159-229ENST00000523816 2764 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 COL3A1-202ENST00000317840 3873 ntTSL 2 BASIC9.24□□□□□ -0.93
P04436 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC9.24□□□□□ -0.93
P04436 CACNB4-209ENST00000534999 2369 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 PLEKHA8P1-202ENST00000336399 1524 ntBASIC9.24□□□□□ -0.93
P04436 ENDOU-202ENST00000422538 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 AKR1D1-202ENST00000411726 2234 ntTSL 2 BASIC9.24□□□□□ -0.93
P04436 PEX5-202ENST00000266564 3170 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
P04436 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
P04436 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 PKNOX2-201ENST00000298282 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
P04436 CYB561A3-202ENST00000426130 3205 ntTSL 5 BASIC9.24□□□□□ -0.93
P04436 CCT5P2-201ENST00000432974 1624 ntBASIC9.23□□□□□ -0.93
P04436 TRIM10-203ENST00000376704 3007 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
P04436 AHCYL2-210ENST00000490911 1884 ntAPPRIS ALT1 TSL 2 BASIC9.23□□□□□ -0.93
P04436 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
P04436 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms