RNA–Protein interactions for RNA: ENST00000534999.6

CACNB4-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB4, Length 2,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-209ENST00000534999 NISCHQ9Y2I1 1504 aa21.71■■□□□ 1.07
CACNB4-209ENST00000534999 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
CACNB4-209ENST00000534999 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
CACNB4-209ENST00000534999 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
CACNB4-209ENST00000534999 CCDC180Q9P1Z9 1646 aa18.28■□□□□ 0.52
CACNB4-209ENST00000534999 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
CACNB4-209ENST00000534999 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
CACNB4-209ENST00000534999 HRCP23327 699 aa18.09■□□□□ 0.49
CACNB4-209ENST00000534999 DCAF8L2P0C7V8 631 aa17.97■□□□□ 0.47
CACNB4-209ENST00000534999 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.45
CACNB4-209ENST00000534999 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
CACNB4-209ENST00000534999 PPARGC1BQ86YN6 1023 aaKnown RBP17.68■□□□□ 0.42
CACNB4-209ENST00000534999 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
CACNB4-209ENST00000534999 TRIM26Q12899 539 aaPredicted RBP17.48■□□□□ 0.39
CACNB4-209ENST00000534999 ABCC9O60706 1549 aa17.45■□□□□ 0.38
CACNB4-209ENST00000534999 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
CACNB4-209ENST00000534999 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
CACNB4-209ENST00000534999 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
CACNB4-209ENST00000534999 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
CACNB4-209ENST00000534999 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
CACNB4-209ENST00000534999 FAM9AQ8IZU1 332 aaPredicted RBP17.13■□□□□ 0.33
CACNB4-209ENST00000534999 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
CACNB4-209ENST00000534999 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
CACNB4-209ENST00000534999 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
CACNB4-209ENST00000534999 NACADO15069 1562 aa16.86■□□□□ 0.29
CACNB4-209ENST00000534999 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
CACNB4-209ENST00000534999 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
CACNB4-209ENST00000534999 WIZO95785 1651 aa16.82■□□□□ 0.28
CACNB4-209ENST00000534999 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
CACNB4-209ENST00000534999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
CACNB4-209ENST00000534999 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
CACNB4-209ENST00000534999 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.26
CACNB4-209ENST00000534999 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
CACNB4-209ENST00000534999 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
CACNB4-209ENST00000534999 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
CACNB4-209ENST00000534999 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
CACNB4-209ENST00000534999 ABCC8Q09428 1581 aa16.57■□□□□ 0.24
CACNB4-209ENST00000534999 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
CACNB4-209ENST00000534999 CEP162Q5TB80 1403 aa16.54■□□□□ 0.24
CACNB4-209ENST00000534999 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
CACNB4-209ENST00000534999 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
CACNB4-209ENST00000534999 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
CACNB4-209ENST00000534999 SOGA1O94964 1423 aa16.48■□□□□ 0.23
CACNB4-209ENST00000534999 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
CACNB4-209ENST00000534999 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
CACNB4-209ENST00000534999 CENPBP07199 599 aaPredicted RBP16.46■□□□□ 0.23
CACNB4-209ENST00000534999 EEA1Q15075 1411 aa16.42■□□□□ 0.22
CACNB4-209ENST00000534999 GTF3C3Q9Y5Q9 886 aa16.41■□□□□ 0.22
CACNB4-209ENST00000534999 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
CACNB4-209ENST00000534999 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
CACNB4-209ENST00000534999 RUSC2Q8N2Y8 1516 aa16.38■□□□□ 0.21
CACNB4-209ENST00000534999 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
CACNB4-209ENST00000534999 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
CACNB4-209ENST00000534999 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
CACNB4-209ENST00000534999 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
CACNB4-209ENST00000534999 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
CACNB4-209ENST00000534999 YTHDC1Q96MU7 727 aaKnown RBP16.18■□□□□ 0.18
CACNB4-209ENST00000534999 KIF21BO75037 1637 aa16.18■□□□□ 0.18
CACNB4-209ENST00000534999 CLIP1P30622 1438 aa16.17■□□□□ 0.18
CACNB4-209ENST00000534999 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
CACNB4-209ENST00000534999 MIER1Q8N108 512 aa16.14■□□□□ 0.17
CACNB4-209ENST00000534999 VPS8Q8N3P4 1428 aa16.13■□□□□ 0.17
CACNB4-209ENST00000534999 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
CACNB4-209ENST00000534999 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
CACNB4-209ENST00000534999 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
CACNB4-209ENST00000534999 APLP2Q06481 763 aa16.08■□□□□ 0.17
CACNB4-209ENST00000534999 BICRAQ9NZM4 1560 aa16.08■□□□□ 0.16
CACNB4-209ENST00000534999 MYT1Q01538 1121 aa16.06■□□□□ 0.16
CACNB4-209ENST00000534999 RAPGEF2Q9Y4G8 1499 aa16.06■□□□□ 0.16
CACNB4-209ENST00000534999 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
CACNB4-209ENST00000534999 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
CACNB4-209ENST00000534999 CLSPNQ9HAW4 1339 aa15.94■□□□□ 0.14
CACNB4-209ENST00000534999 TOP2BQ02880 1626 aa15.92■□□□□ 0.14
CACNB4-209ENST00000534999 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
CACNB4-209ENST00000534999 ARAP1Q96P48 1450 aa15.88■□□□□ 0.13
CACNB4-209ENST00000534999 ERICH3Q5RHP9 1530 aa15.87■□□□□ 0.13
CACNB4-209ENST00000534999 PRXQ9BXM0 1461 aa15.86■□□□□ 0.13
CACNB4-209ENST00000534999 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
CACNB4-209ENST00000534999 KANK4Q5T7N3 995 aaPredicted RBP15.84■□□□□ 0.13
CACNB4-209ENST00000534999 RRBP1Q9P2E9 1410 aaKnown RBP15.8■□□□□ 0.12
CACNB4-209ENST00000534999 CUX2O14529 1486 aa15.75■□□□□ 0.11
CACNB4-209ENST00000534999 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
CACNB4-209ENST00000534999 CCNB3Q8WWL7 1395 aa15.73■□□□□ 0.11
CACNB4-209ENST00000534999 CUX1P39880 1505 aa15.72■□□□□ 0.11
CACNB4-209ENST00000534999 KIF27Q86VH2 1401 aa15.72■□□□□ 0.11
CACNB4-209ENST00000534999 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
CACNB4-209ENST00000534999 ITGAEP38570 1179 aa15.67■□□□□ 0.1
CACNB4-209ENST00000534999 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
CACNB4-209ENST00000534999 RAB3GAP2Q9H2M9 1393 aa15.63■□□□□ 0.09
CACNB4-209ENST00000534999 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
CACNB4-209ENST00000534999 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
CACNB4-209ENST00000534999 CFTRP13569 1480 aa15.59■□□□□ 0.09
CACNB4-209ENST00000534999 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
CACNB4-209ENST00000534999 TSHZ2Q9NRE2 1034 aa15.56■□□□□ 0.08
CACNB4-209ENST00000534999 TIAM1Q13009 1591 aa15.56■□□□□ 0.08
CACNB4-209ENST00000534999 MAP3K1Q13233 1512 aa15.55■□□□□ 0.08
CACNB4-209ENST00000534999 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
CACNB4-209ENST00000534999 IGF1RP08069 1367 aa15.53■□□□□ 0.08
CACNB4-209ENST00000534999 LRRC9Q6ZRR7 1453 aa15.51■□□□□ 0.07
CACNB4-209ENST00000534999 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms