Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 UBE2DNL-204ENST00000602536 740 ntBASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCA3PQ9Y6N3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLCA3PQ9Y6N3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLCA3PQ9Y6N3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLCA3PQ9Y6N3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLCA3PQ9Y6N3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 AC004911.1-201ENST00000416316 871 ntBASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 AC092437.1-201ENST00000624794 1048 ntBASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCA3PQ9Y6N3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCA3PQ9Y6N3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 AC061975.6-201ENST00000579045 1553 ntBASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 SLC7A5P2-201ENST00000553010 536 ntBASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 AC244015.2-201ENST00000616358 1861 ntBASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCA3PQ9Y6N3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 KRT16P2-201ENST00000414673 1423 ntBASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms