Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
COPG1Q9Y678 AL358852.1-201ENST00000623174 1268 ntBASIC20.46■□□□□ 0.87
COPG1Q9Y678 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.46■□□□□ 0.87
COPG1Q9Y678 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COPG1Q9Y678 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPG1Q9Y678 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
COPG1Q9Y678 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COPG1Q9Y678 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPG1Q9Y678 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPG1Q9Y678 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COPG1Q9Y678 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
COPG1Q9Y678 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.46■□□□□ 0.87
COPG1Q9Y678 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.46■□□□□ 0.87
COPG1Q9Y678 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
COPG1Q9Y678 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 AC003102.1-202ENST00000563394 1796 ntBASIC20.45■□□□□ 0.86
COPG1Q9Y678 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 SLC47A1P1-202ENST00000449666 945 ntBASIC20.45■□□□□ 0.86
COPG1Q9Y678 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COPG1Q9Y678 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
COPG1Q9Y678 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 OR2I1P-207ENST00000453522 948 ntBASIC20.44■□□□□ 0.86
COPG1Q9Y678 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.44■□□□□ 0.86
COPG1Q9Y678 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPG1Q9Y678 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COPG1Q9Y678 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COPG1Q9Y678 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COPG1Q9Y678 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
COPG1Q9Y678 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.43■□□□□ 0.86
COPG1Q9Y678 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 AC123595.1-201ENST00000440769 1046 ntBASIC20.43■□□□□ 0.86
COPG1Q9Y678 AC010141.3-201ENST00000456659 717 ntBASIC20.43■□□□□ 0.86
COPG1Q9Y678 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.43■□□□□ 0.86
COPG1Q9Y678 AC087239.1-201ENST00000622671 572 ntBASIC20.43■□□□□ 0.86
COPG1Q9Y678 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COPG1Q9Y678 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPG1Q9Y678 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPG1Q9Y678 DUX4L2-201ENST00000561772 1275 ntBASIC20.42■□□□□ 0.86
COPG1Q9Y678 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
COPG1Q9Y678 DUX4L6-201ENST00000626483 1275 ntBASIC20.42■□□□□ 0.86
COPG1Q9Y678 DUX4L1-201ENST00000627662 1275 ntBASIC20.42■□□□□ 0.86
COPG1Q9Y678 DUX4L8-201ENST00000629013 1275 ntBASIC20.42■□□□□ 0.86
COPG1Q9Y678 DUX4L3-201ENST00000630187 1275 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms