Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 AC005224.4-201ENST00000583262 1652 ntBASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGB3Q9Y5G1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 DUX4L2-201ENST00000561772 1275 ntBASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 TERF1P2-201ENST00000583350 1212 ntBASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 DUX4L6-201ENST00000626483 1275 ntBASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 DUX4L1-201ENST00000627662 1275 ntBASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 DUX4L8-201ENST00000629013 1275 ntBASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 DUX4L3-201ENST00000630187 1275 ntBASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 DUX4L7-201ENST00000630678 1275 ntBASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 DUX4L5-201ENST00000630834 1275 ntBASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHGB3Q9Y5G1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 AC055733.4-201ENST00000638462 1354 ntBASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB3Q9Y5G1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 CCDC92B-201ENST00000575506 885 ntBASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 MIR6084-201ENST00000622012 110 ntBASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB3Q9Y5G1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms