Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP3Q9Y446 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PKP3Q9Y446 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PKP3Q9Y446 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PKP3Q9Y446 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.92■□□□□ 0.94
PKP3Q9Y446 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP3Q9Y446 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP3Q9Y446 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.91■□□□□ 0.94
PKP3Q9Y446 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP3Q9Y446 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP3Q9Y446 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP3Q9Y446 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP3Q9Y446 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.91■□□□□ 0.94
PKP3Q9Y446 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PKP3Q9Y446 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PKP3Q9Y446 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.91■□□□□ 0.94
PKP3Q9Y446 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.9■□□□□ 0.94
PKP3Q9Y446 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PKP3Q9Y446 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PKP3Q9Y446 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PKP3Q9Y446 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.9■□□□□ 0.94
PKP3Q9Y446 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.9■□□□□ 0.94
PKP3Q9Y446 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PKP3Q9Y446 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.9■□□□□ 0.94
PKP3Q9Y446 SLC7A5P2-201ENST00000553010 536 ntBASIC20.9■□□□□ 0.94
PKP3Q9Y446 AC137761.2-201ENST00000561729 223 ntBASIC20.9■□□□□ 0.94
PKP3Q9Y446 AC145350.3-201ENST00000569033 163 ntBASIC20.9■□□□□ 0.94
PKP3Q9Y446 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.9■□□□□ 0.94
PKP3Q9Y446 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PKP3Q9Y446 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PKP3Q9Y446 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PKP3Q9Y446 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PKP3Q9Y446 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PKP3Q9Y446 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PKP3Q9Y446 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PKP3Q9Y446 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PKP3Q9Y446 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.89■□□□□ 0.94
PKP3Q9Y446 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP3Q9Y446 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP3Q9Y446 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP3Q9Y446 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.89■□□□□ 0.93
PKP3Q9Y446 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP3Q9Y446 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP3Q9Y446 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.89■□□□□ 0.93
PKP3Q9Y446 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PKP3Q9Y446 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP3Q9Y446 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP3Q9Y446 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.88■□□□□ 0.93
PKP3Q9Y446 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.88■□□□□ 0.93
PKP3Q9Y446 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PKP3Q9Y446 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PKP3Q9Y446 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.88■□□□□ 0.93
PKP3Q9Y446 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP3Q9Y446 AL049796.1-201ENST00000565336 1766 ntBASIC20.87■□□□□ 0.93
PKP3Q9Y446 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP3Q9Y446 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP3Q9Y446 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PKP3Q9Y446 AF106564.1-201ENST00000607058 2553 ntBASIC20.87■□□□□ 0.93
PKP3Q9Y446 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PKP3Q9Y446 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.87■□□□□ 0.93
PKP3Q9Y446 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP3Q9Y446 AC016769.1-201ENST00000409132 1010 ntBASIC20.87■□□□□ 0.93
PKP3Q9Y446 KRT18P11-201ENST00000435214 1283 ntBASIC20.87■□□□□ 0.93
PKP3Q9Y446 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PKP3Q9Y446 UBE2DNL-204ENST00000602536 740 ntBASIC20.87■□□□□ 0.93
PKP3Q9Y446 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP3Q9Y446 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP3Q9Y446 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
PKP3Q9Y446 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP3Q9Y446 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PKP3Q9Y446 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP3Q9Y446 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP3Q9Y446 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP3Q9Y446 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.86■□□□□ 0.93
PKP3Q9Y446 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.86■□□□□ 0.93
PKP3Q9Y446 AC245052.3-201ENST00000450182 901 ntBASIC20.86■□□□□ 0.93
PKP3Q9Y446 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.86■□□□□ 0.93
PKP3Q9Y446 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PKP3Q9Y446 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.86■□□□□ 0.93
PKP3Q9Y446 SLC7A5P1-201ENST00000568957 537 ntBASIC20.86■□□□□ 0.93
PKP3Q9Y446 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.86■□□□□ 0.93
PKP3Q9Y446 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP3Q9Y446 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.86■□□□□ 0.93
PKP3Q9Y446 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP3Q9Y446 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.86■□□□□ 0.93
PKP3Q9Y446 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP3Q9Y446 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP3Q9Y446 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP3Q9Y446 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms